DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp12-46 and Usp17ld

DIOPT Version :10

Sequence 1:NP_651099.1 Gene:Usp12-46 / 42702 FlyBaseID:FBgn0039025 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_001001559.2 Gene:Usp17ld / 384701 MGIID:3051372 Length:545 Species:Mus musculus


Alignment Length:401 Identity:97/401 - (24%)
Similarity:150/401 - (37%) Gaps:114/401 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 GLVNFGNTCYSNSVLQALYFCKPFREKVL--EYKAKNKRPKETLLSCLADLFYSIATQKKKVGSI 87
            ||.|.||:||.|:.||.|....|..:.:|  ||......| |....|..:...:.:......|.:
Mouse    52 GLQNTGNSCYLNAALQCLTHTPPLADYMLSQEYSQTCCSP-EGCKMCAMEAHVTQSLLHSHSGDV 115

  Fly    88 -APKKFITRLRKEKEEFDNYMQQDAHEFLNFLINHINEIILAERNAGPSNGNPKATNQGGSTSAM 151
             .|.:.:|      ..|..:.|:||||||.|.:..::|..|                        
Mouse   116 MKPSQILT------SAFHKHQQEDAHEFLMFTLETMHESCL------------------------ 150

  Fly   152 ASSIASKSSSTSNSNSNSNSTTNSNGNSSNSTGSLNANTSVLDASGSLTATTTPIISGNGTGTNG 216
              .:..:|..||..:|                                     ||          
Mouse   151 --QVHRQSEPTSEDSS-------------------------------------PI---------- 166

  Fly   217 ANSEPTWVHEIFQGILTSETRCLNCETVSSKDENFFDLQVDVDQNTSITHCLRCFSNTETLCSDN 281
                    |:||.|:..|:.:||:|:..|...:.|.|:.:|:....|:...|.....:|.|..:|
Mouse   167 --------HDIFGGLWRSQIKCLHCQGTSDTYDRFLDVPLDISSAQSVNQALWDTEKSEELRGEN 223

  Fly   282 KFKCDNCCSYQEAQKRMRVKKLPMILALHLKRFK-YMEQFNRHIKVSHRVVFP--LELRLFNTSD 343
            .:.|..|.....|.|.:.:...|.:|.|.||||. :|..     |:..:|.:|  |:|:.: .|.
Mouse   224 AYYCGRCRQKMPASKTLHIHSAPKVLLLVLKRFSAFMGN-----KLDRKVSYPEFLDLKPY-LSQ 282

  Fly   344 DAVNPDRLYDLTAVVIHCGSGPNRGHYISIVKS-HGLWLLFDDDMVDKIEASTIEDFYGLTSDIH 407
            ....| ..|.|.||::|.|:..:.|||.|.||: ||.|...||..|...:.:::           
Mouse   283 PTGGP-LPYALYAVLVHEGATCHSGHYFSYVKAGHGKWYKMDDTKVTSCDVTSV----------- 335

  Fly   408 KSSETGYILFY 418
             .:|..|:|||
Mouse   336 -LNENAYVLFY 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp12-46NP_651099.1 Peptidase_C19G 25..419 CDD:239128 97/401 (24%)
Usp17ldNP_001001559.2 Peptidase_C19E 50..346 CDD:239126 97/401 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 367..443
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 521..545
Blue background indicates that the domain is not in the aligned region.

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