DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp12-46 and Usp17lb

DIOPT Version :10

Sequence 1:NP_651099.1 Gene:Usp12-46 / 42702 FlyBaseID:FBgn0039025 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_958811.2 Gene:Usp17lb / 381944 MGIID:3051498 Length:468 Species:Mus musculus


Alignment Length:437 Identity:99/437 - (22%)
Similarity:159/437 - (36%) Gaps:131/437 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 QLEREIGSDLFPPNEHYF----------GLVNFGNTCYSNSVLQALYFCKPFREKVLEYKAKNKR 61
            |.|.::..:|....:|..          ||.|.||:||.|:.||.|....|..:.:|     ::.
Mouse    24 QDEAQVVEELAANGKHSLSWESPQGPGCGLQNTGNSCYLNAALQCLTHTPPLADYML-----SQE 83

  Fly    62 PKETLLS------CLADLFYSIATQKKKVGSI-APKKFITRLRKEKEEFDNYMQQDAHEFLNFLI 119
            ..:|..|      |..:...:.:......|.: .|.:.:|      ..|....|:||||||.|.:
Mouse    84 HSQTCCSPEGCKMCAMEAHVTQSLLHTHSGDVMKPSQNLT------SAFHKRKQEDAHEFLMFTL 142

  Fly   120 NHINEIILAERNAGPSNGNPKATNQGGSTSAMASSIASKSSSTSNSNSNSNSTTNSNGNSSNSTG 184
            ..::|..|                          .:..:|..||..:|                 
Mouse   143 ETMHESCL--------------------------QVHRQSEPTSEDSS----------------- 164

  Fly   185 SLNANTSVLDASGSLTATTTPIISGNGTGTNGANSEPTWVHEIFQGILTSETRCLNCETVSSKDE 249
                                ||                  |:||.|...|:.:|.:|:..|...:
Mouse   165 --------------------PI------------------HDIFGGWWRSQIKCHHCQGTSYSYD 191

  Fly   250 NFFDLQVDVDQNTSITHCLRCFSNTETLCSDNKFKCDNCCSYQEAQKRMRVKKLPMILALHLKRF 314
            .|.|:.:|:....|:...|:.....|.||.:|.:.|..|...:.|.|.:::...|.:|.|.||||
Mouse   192 PFLDIPLDISSVQSVKQALQDTEKAEELCGENSYYCGRCRQKKPASKTLKLYSAPKVLMLVLKRF 256

  Fly   315 KYMEQFNRHIKVSHRVVFP--LELRLFNTSDDAVNPDRLYDLTAVVIHCGSGPNRGHYISIVKS- 376
                ..:...|:..:|.:|  |:|:.: .|.....| ..|.|.||::|.|:..:.|||...||: 
Mouse   257 ----SGSMGKKLDRKVSYPEFLDLKPY-LSQPTGGP-LPYALYAVLVHEGATCHSGHYFCCVKAG 315

  Fly   377 HGLWLLFDDDMVDKIEASTIEDFYGLTSDIHKSSETGYILFY-QSRD 422
            ||.|...||..|...:.:::            .:|..|:||| |..|
Mouse   316 HGKWYKMDDTKVTSCDVTSV------------LNENAYVLFYVQQND 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp12-46NP_651099.1 Peptidase_C19G 25..419 CDD:239128 93/404 (23%)
Usp17lbNP_958811.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..20
Peptidase_C19E 50..346 CDD:239126 92/405 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 374..449
Blue background indicates that the domain is not in the aligned region.

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