DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp12-46 and DUBAI

DIOPT Version :10

Sequence 1:NP_651099.1 Gene:Usp12-46 / 42702 FlyBaseID:FBgn0039025 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_610784.1 Gene:DUBAI / 36361 FlyBaseID:FBgn0033738 Length:852 Species:Drosophila melanogaster


Alignment Length:417 Identity:113/417 - (27%)
Similarity:185/417 - (44%) Gaps:58/417 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 GLVNFGNTCYSNSVLQALYFCKPFREKVLEYKAKNKRPKETLLSCLADLFYSIATQKKKVG---- 85
            ||||.|||||.|||||||.....|..::|            |:.|.:.|...:..|...:.    
  Fly   359 GLVNLGNTCYMNSVLQALAMTSDFSRQIL------------LIECNSVLLMKVQQQIALMHHSLR 411

  Fly    86 -SIAPKKFITRLRKEKEEFDNYMQQDAHEFLNFLINHINE-IILAERNAGPSNGNPKATNQGGST 148
             .:.|.:.:...|  ...|...:|||:.|||.:|::.::| .|.:....|.|.|.||...:....
  Fly   412 YELTPSRVLNATR--PPSFTPGLQQDSSEFLGYLLDLLHEHEINSSSVTGHSVGPPKTGREVDDV 474

  Fly   149 SAMAS-SIASKSSSTSNSNSNSNSTTNSNGNSSNSTGSLNANTSVLDASGSLTATTTPIISGNGT 212
            .|:.| .|.|......||..:..|:.:::.|.::..              :.|...||..:.||.
  Fly   475 PALLSEDILSSGVIPYNSKDHELSSGSNSDNCNHKP--------------TPTPPATPTKATNGL 525

  Fly   213 GTNGANSE----PTWVHEIFQGILTSETRCLNCETVSSKDENFFDLQVDVDQ--------NTSIT 265
            ...|...:    |:.:.:.|.|.|::..|||||...|..:::|.:||:....        |.|:.
  Fly   526 KQQGQQVDQAKPPSTIDKTFAGKLSTTYRCLNCGWESRNEDSFRELQLSFPDDKEDCGATNYSVQ 590

  Fly   266 HCLRCFSNTETLCSDNKFKCDNCCSYQEAQKRMRVKKLPMILALHLKRFKYMEQFNRHIKVSHRV 330
            ..:..:.:.|.|..||::.|..|....:|::.:.|.:.|..|.|.||:|||.::::...|:.|:|
  Fly   591 DLIEYYCSPEKLDGDNQYFCPQCKKLCDAERHIGVTQAPKNLILTLKQFKYDQKYHFRTKLMHKV 655

  Fly   331 VFPLELRLFNTSDDAVNPDRL--YDLTAVVIHCGSGPNRGHYISIVKSHGL-WLLFDDDMVDKIE 392
            .....:.:..::.|::.....  |||.|.|:|.|...:.|||.:....... |..|:|::|..  
  Fly   656 FHDESVTVKMSAKDSLQEMSTVHYDLYAGVVHAGYSMDSGHYFTFAADQAKNWYKFNDNVVTH-- 718

  Fly   393 ASTIEDFYGLTSDIHKSSETGYILFYQ 419
             |..|:.:.||     |..|.|||||:
  Fly   719 -SKPEEMHNLT-----SPNTPYILFYK 739

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp12-46NP_651099.1 Peptidase_C19G 25..419 CDD:239128 112/415 (27%)
DUBAINP_610784.1 Peptidase_C19H 359..739 CDD:239129 112/415 (27%)

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