DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp12-46 and Usp12

DIOPT Version :10

Sequence 1:NP_651099.1 Gene:Usp12-46 / 42702 FlyBaseID:FBgn0039025 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_001160048.1 Gene:Usp12 / 360763 RGDID:1308045 Length:370 Species:Rattus norvegicus


Alignment Length:422 Identity:266/422 - (63%)
Similarity:305/422 - (72%) Gaps:67/422 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGANVSQLEREIGSDLFPPNEHYFGLVNFGNTCYSNSVLQALYFCKPFREKVLEYKAKNKRPKET 65
            ||||.|.||:|||.:.||.|||||||||||||||.||||||||||:|||:|||.||:: .|.||:
  Rat    16 MGANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFRDKVLAYKSQ-PRKKES 79

  Fly    66 LLSCLADLFYSIATQKKKVGSIAPKKFITRLRKEKEEFDNYMQQDAHEFLNFLINHINEIILAER 130
            ||:||||||:||||||||||.|.|||||||||||.|.||||||||||||||:|:|.|.:|:..||
  Rat    80 LLTCLADLFHSIATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEER 144

  Fly   131 NAGPSNGNPKATNQGGSTSAMASSIASKSSSTSNSNSNSNSTTNSNGNSSNSTGSLNANTSVLDA 195
            .....||..:                             |...:|..|:|               
  Rat   145 KQEKQNGRLR-----------------------------NGDVDSEDNNS--------------- 165

  Fly   196 SGSLTATTTPIISGNGTGTNGANSEPTWVHEIFQGILTSETRCLNCETVSSKDENFFDLQVDVDQ 260
                    ||              :||||||||||.||:|||||.|||:|||||:|.||.|||:|
  Rat   166 --------TP--------------DPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQ 208

  Fly   261 NTSITHCLRCFSNTETLCSDNKFKCDNCCSYQEAQKRMRVKKLPMILALHLKRFKYMEQFNRHIK 325
            |||||||||.|||||||||:.|:.|:.|.|.|||.|||:||||||||||||||||||:|.:|:.|
  Rat   209 NTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRYTK 273

  Fly   326 VSHRVVFPLELRLFNTSDDAVNPDRLYDLTAVVIHCGSGPNRGHYISIVKSHGLWLLFDDDMVDK 390
            :|:||||||||||||||.||.||||:|||.|||:||||||||||||:|||||..|||||||:|:|
  Rat   274 LSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEK 338

  Fly   391 IEASTIEDFYGLTSDIHKSSETGYILFYQSRD 422
            |:|..||:||||||||.|:||:||||||||||
  Rat   339 IDAQAIEEFYGLTSDISKNSESGYILFYQSRD 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp12-46NP_651099.1 Peptidase_C19G 25..419 CDD:239128 244/393 (62%)
Usp12NP_001160048.1 Required for plasma membrane localization of USP12/WDR20. /evidence=ECO:0000250|UniProtKB:O75317 1..4
Peptidase_C19G 40..367 CDD:239128 244/393 (62%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 146..168 8/87 (9%)
Blue background indicates that the domain is not in the aligned region.

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