DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp12-46 and Usp35

DIOPT Version :9

Sequence 1:NP_651099.1 Gene:Usp12-46 / 42702 FlyBaseID:FBgn0039025 Length:424 Species:Drosophila melanogaster
Sequence 2:XP_006507886.1 Gene:Usp35 / 244144 MGIID:2685339 Length:1072 Species:Mus musculus


Alignment Length:561 Identity:109/561 - (19%)
Similarity:171/561 - (30%) Gaps:248/561 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 GLVNFGNTCYSNSVLQALYFCKPFREKVLEYKAKNKRPKETLLSCLADLFYSIATQKKKVGSIAP 89
            ||:|.|||||.|||||||:....||..||.....|.:|   |::.|..||..:...::.  :|:|
Mouse   505 GLINLGNTCYVNSVLQALFMASDFRHCVLRLTENNSQP---LMTKLQWLFAFLEHSQRP--AISP 564

  Fly    90 KKFITRLRKEKEEFDNYMQQDAHEFLNFLINHINEIILAERNAGPSNGNPKATNQGGSTSAMASS 154
            :.|::  ......|....|||..|:|.:|::.::|              .:.|..........||
Mouse   565 ENFLS--ASWTPWFSPGTQQDCSEYLKYLLDRLHE--------------EEKTGMRICQKLKQSS 613

  Fly   155 IASKSSSTSNSNSNSNSTTNSNGNSSNSTGSLNANTSVLDASGSLTATTTPIISGNGTGTNGANS 219
            :.|......:||:.|                                                  
Mouse   614 LPSPQEELPSSNATS-------------------------------------------------- 628

  Fly   220 EPTWVHEIFQGILTSETRCLNCETVSSKDENFFDLQV---------------------DV----- 258
                |.::|.|.:.:...||:|..|||::|.|.||.:                     ||     
Mouse   629 ----VEKMFGGKIVTRICCLHCLNVSSREEAFTDLSLAFPPPERSRHRRLGSVMLPTEDVRVQEL 689

  Fly   259 ----------------------------------------------------------------- 258
                                                                             
Mouse   690 TLAPRAPGAQRQRKRCITGDAPRTGLDSEGVDTIGTGGRSGQEKVEREQAGKEKEVAEDREEEGT 754

  Fly   259 --------------------------------------------------------DQNTSITHC 267
                                                                    :.:.|:...
Mouse   755 REEEKEEGEEKDKEKEKKEDEKEKEAENGKEKEGDSLGPGTHREAATPPREQTCGPEGSRSVLDL 819

  Fly   268 LRCFSNTETLCSDNKFKCDNCCSYQEAQKRMRVKKLPMILALHLKRFKYMEQFNRHIKVSHRVVF 332
            :..|.:.|.|.::|::.|::|.|.|:|:|.:.:.:.|..|.|.|.||.:..:..|..|:...|..
Mouse   820 VNYFLSPERLTAENRYYCESCASLQDAEKVVELSQGPRYLILTLLRFSFDLRTMRRRKILDDVTI 884

  Fly   333 PLELRLFNTSDDAVNPDRLYDLTAVVIHCGSGPNRGHYISIVKS-----------------HGLW 380
            ||.|||    ..|....:.|||.:||:|.|.....|||....:.                 ...|
Mouse   885 PLLLRL----PLAGGQGQAYDLCSVVVHSGVSSESGHYYCYAREGAARPAPVLGSTERPEPENQW 945

  Fly   381 LLFDDDMVDKIEASTIEDFYGLTSDIHKSSETGYILFYQSR 421
            .||:|   .::..|:.|....:||...|  :|.|:|||:.|
Mouse   946 YLFND---TRVSYSSFESVSNVTSFFPK--DTAYVLFYRQR 981

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp12-46NP_651099.1 Peptidase_C19G 25..419 CDD:239128 107/557 (19%)
Usp35XP_006507886.1 Peptidase_C19 505..979 CDD:351799 107/557 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1864
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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