DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp12-46 and C04E6.5

DIOPT Version :9

Sequence 1:NP_651099.1 Gene:Usp12-46 / 42702 FlyBaseID:FBgn0039025 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_504537.1 Gene:C04E6.5 / 178977 WormBaseID:WBGene00015422 Length:515 Species:Caenorhabditis elegans


Alignment Length:468 Identity:109/468 - (23%)
Similarity:159/468 - (33%) Gaps:175/468 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 LVNFGNTCYSNSVLQALYFCKPFR----------EKVLEYKAKNKRPKETLLSC-----LADLFY 75
            |||.||:|:.||.:|||..|..|.          .|.::|........|.|  |     |.|...
 Worm   147 LVNTGNSCFLNSTMQALSSCHSFALRCEQLYCLVRKNIDYFDNEASHSEVL--CRKYRVLIDFLK 209

  Fly    76 SIA--TQKKKVGSIAPKKFITRLRKEKE-------EFDNYMQQDAHEFLNFLINHINEIILAERN 131
            .:|  |::.......|:.....|:..:|       :|.|..||||||||..|...|:::  ||. 
 Worm   210 IMAALTKRSNSSKTQPEIIEANLQTFRELIGMIRNDFANKNQQDAHEFLLMLFEAIDDV--AEY- 271

  Fly   132 AGPSNGNPKATNQGGSTSAMASSIASKSSSTSNSNSNSNSTTNSNGNSSNSTGSLNANTSVLDAS 196
                    ||.|:|...         |.:...|                                
 Worm   272 --------KADNEGDDV---------KEAKQLN-------------------------------- 287

  Fly   197 GSLTATTTPIISGNGTGTNGANSEPTWVHEIFQGILTSETRCLNCETVSSKD-----ENFFDLQV 256
                    ||                   |.|:  ...|| |..|:..|.::     .|  ||.|
 Worm   288 --------PI-------------------EAFK--FNVET-CYVCKGCSKEEVRVDVRN--DLAV 320

  Fly   257 DVDQNTSITHCLRCFSNTETLCSDNKFKCDNCCSYQEAQKRMRVKKLPMILALHLKRFKYME--Q 319
            .:..|.|:...|....:|.|....   ||.: |::|.|....|:.:.|..|.::|:|:: :|  |
 Worm   321 HMRDNLSVQELLSSSFSTWTPIEK---KCSS-CNHQHAILSERITRFPECLVINLERYQ-LEGPQ 380

  Fly   320 FNR-----------HIKVSHRVVFP-LELRLFNTSDDAVNP------DRL--------------- 351
            |:.           .:.:|....|| :|......|:...:.      ||:               
 Worm   381 FSTKKINCSLEPSFELDISSLQKFPEIEKNGLEQSEKQQDSQYGQLLDRMKSCEIIKCCETKNII 445

  Fly   352 -------YDLTAVVIHCGSGPNRGHYISIVK--SHGLWLLFDDDMVDKIEASTIEDFYGLTSDIH 407
                   |.|.|.:.|.|..|..||||:..:  :...||...||:   |..:|       .|:|.
 Worm   446 MEEKHDKYSLVAAICHLGETPTNGHYIAYTREDTENSWLYCSDDL---IRPAT-------RSEIS 500

  Fly   408 KSSET-GYILFYQ 419
            .|..| ||||||:
 Worm   501 LSIRTSGYILFYE 513

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp12-46NP_651099.1 Peptidase_C19G 25..419 CDD:239128 108/466 (23%)
C04E6.5NP_504537.1 Peptidase_C19Q 146..513 CDD:239138 108/466 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1864
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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