DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp12-46 and usp12

DIOPT Version :10

Sequence 1:NP_651099.1 Gene:Usp12-46 / 42702 FlyBaseID:FBgn0039025 Length:424 Species:Drosophila melanogaster
Sequence 2:XP_002941584.2 Gene:usp12 / 100494517 XenbaseID:XB-GENE-1009317 Length:370 Species:Xenopus tropicalis


Alignment Length:423 Identity:267/423 - (63%)
Similarity:302/423 - (71%) Gaps:69/423 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGANVSQLEREIGSDLFPPNEHYFGLVNFGNTCYSNSVLQALYFCKPFREKVLEYKAKNKRPKET 65
            ||||.|.||:|||.:.||.|||||||||||||||.||||||||||:|||||||.||:: .|.||.
 Frog    16 MGANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQ-PRKKEN 79

  Fly    66 LLSCLADLFYSIATQKKKVGSIAPKKFITRLRKEKEEFDNYMQQDAHEFLNFLINHINEIILAER 130
            ||:||||||:||||||||||.|.|||||||||||.|.||||||||||||||:|:|.|.:|:..||
 Frog    80 LLTCLADLFHSIATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEER 144

  Fly   131 NAGPSNGN-PKATNQGGSTSAMASSIASKSSSTSNSNSNSNSTTNSNGNSSNSTGSLNANTSVLD 194
            .....||. |                                    |||..|.            
 Frog   145 KQEKQNGRIP------------------------------------NGNIDNE------------ 161

  Fly   195 ASGSLTATTTPIISGNGTGTNGANSEPTWVHEIFQGILTSETRCLNCETVSSKDENFFDLQVDVD 259
                               .|.:..:||||||||||.||:|||||.|||:|||||:|.||.|||:
 Frog   162 -------------------NNNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVE 207

  Fly   260 QNTSITHCLRCFSNTETLCSDNKFKCDNCCSYQEAQKRMRVKKLPMILALHLKRFKYMEQFNRHI 324
            ||||||||||.|||||||||:.|:.|:.|.|.|||.|||:||||||||||||||||||:|.:|:.
 Frog   208 QNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRYT 272

  Fly   325 KVSHRVVFPLELRLFNTSDDAVNPDRLYDLTAVVIHCGSGPNRGHYISIVKSHGLWLLFDDDMVD 389
            |:|:||||||||||||||.||.||||:|||.|||:||||||||||||:|||||..|||||||:|:
 Frog   273 KLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVE 337

  Fly   390 KIEASTIEDFYGLTSDIHKSSETGYILFYQSRD 422
            ||:|..||:||||||||.|:||:||||||||||
 Frog   338 KIDAQAIEEFYGLTSDISKNSESGYILFYQSRD 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp12-46NP_651099.1 Peptidase_C19G 25..419 CDD:239128 245/394 (62%)
usp12XP_002941584.2 Peptidase_C19G 40..367 CDD:239128 245/394 (62%)

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