DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp12-46 and usp46

DIOPT Version :9

Sequence 1:NP_651099.1 Gene:Usp12-46 / 42702 FlyBaseID:FBgn0039025 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_001231910.1 Gene:usp46 / 100148916 ZFINID:ZDB-GENE-070705-213 Length:370 Species:Danio rerio


Alignment Length:422 Identity:267/422 - (63%)
Similarity:307/422 - (72%) Gaps:63/422 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGANVSQLEREIGSDLFPPNEHYFGLVNFGNTCYSNSVLQALYFCKPFREKVLEYKAKNKRPKET 65
            ||.|.|.||::||.:.||.|||||||||||||||.||||||||||:||||.||.||.:.|: ||.
Zfish    12 MGTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKVQQKK-KEN 75

  Fly    66 LLSCLADLFYSIATQKKKVGSIAPKKFITRLRKEKEEFDNYMQQDAHEFLNFLINHINEIILAER 130
            ||:||||||:||||||||||.|.|||||:|||||.:.||||||||||||||:|:|.:.:|:..||
Zfish    76 LLTCLADLFHSIATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTVADILQEER 140

  Fly   131 NAGPSNGNPKATNQGGSTSAMASSIASKSSSTSNSNSNSNSTTNSNGNSSNSTGSLNANTSVLDA 195
            .....||..|  |.|       ::||:.:....|                               
Zfish   141 KQEKQNGRLK--NNG-------TAIATDTEPEQN------------------------------- 165

  Fly   196 SGSLTATTTPIISGNGTGTNGANSEPTWVHEIFQGILTSETRCLNCETVSSKDENFFDLQVDVDQ 260
                                  ..:||||||||||.||:|||||||||||||||:|.||.|||:|
Zfish   166 ----------------------KIDPTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQ 208

  Fly   261 NTSITHCLRCFSNTETLCSDNKFKCDNCCSYQEAQKRMRVKKLPMILALHLKRFKYMEQFNRHIK 325
            |||||||||.|||||||||:.|:.|:.|||.||||||||||||||||||||||||||||.:|:.|
Zfish   209 NTSITHCLRDFSNTETLCSEYKYYCEMCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQLHRYTK 273

  Fly   326 VSHRVVFPLELRLFNTSDDAVNPDRLYDLTAVVIHCGSGPNRGHYISIVKSHGLWLLFDDDMVDK 390
            :|:||||||||||||||.||||.||:|||.|||:||||||||||||:||||||.|||||||:|:|
Zfish   274 LSYRVVFPLELRLFNTSGDAVNLDRMYDLVAVVVHCGSGPNRGHYITIVKSHGFWLLFDDDIVEK 338

  Fly   391 IEASTIEDFYGLTSDIHKSSETGYILFYQSRD 422
            |:|..||:||||||||.|:||:|||||||||:
Zfish   339 IDAQAIEEFYGLTSDISKNSESGYILFYQSRE 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp12-46NP_651099.1 Peptidase_C19G 25..419 CDD:239128 248/393 (63%)
usp46NP_001231910.1 UCH 34..366 CDD:278850 249/394 (63%)
Peptidase_C19G 36..367 CDD:239128 248/393 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170580200
Domainoid 1 1.000 486 1.000 Domainoid score I379
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H56957
Inparanoid 1 1.050 527 1.000 Inparanoid score I1196
OMA 1 1.010 - - QHG54027
OrthoDB 1 1.010 - - D378361at2759
OrthoFinder 1 1.000 - - FOG0001354
OrthoInspector 1 1.000 - - otm24593
orthoMCL 1 0.900 - - OOG6_101733
Panther 1 1.100 - - O PTHR24006
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2327
SonicParanoid 1 1.000 - - X844
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1413.940

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