DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nepl14 and nep-3

DIOPT Version :10

Sequence 1:NP_651097.1 Gene:Nepl14 / 42700 FlyBaseID:FBgn0039023 Length:696 Species:Drosophila melanogaster
Sequence 2:NP_494679.2 Gene:nep-3 / 173730 WormBaseID:WBGene00016778 Length:634 Species:Caenorhabditis elegans


Alignment Length:697 Identity:148/697 - (21%)
Similarity:261/697 - (37%) Gaps:202/697 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 SIDPCVDFYAYACGNWK-------STLTPQQQLQQQTDRELLLLVEEAVRREDSVIVRQAKELFK 116
            |:|||.:||..|||.:.       |....:||:.::..|:.|...:.:..:.::    ..|.|::
 Worm    81 SVDPCENFYQAACGKYNEHNVIDGSRTAQKQQIVKRLIRDFLHKNQSSTSKSEN----SMKLLYE 141

  Fly   117 SCVSAQAHQSQQQQHFLSEF---INQNGGFPAVPGSQWAVHHHDYNWLSVLGGLRLRYGMDILIG 178
            .|..|:..:....|:.|.|.   |.:.|.:|.:          |.||    .|.:......:|..
 Worm   142 KCKEAKTIKVLGNQNLLQEIFMNIQKIGSWPVL----------DENW----DGKKFNLNEMLLSL 192

  Fly   179 LRVGY-NYG----NVNENSLYLSEPSTLIPTELCTRNRSDIRDSIYEPLEHRVASELKSWLALGH 238
            :|:|. |:|    .::.::....:|:...||.   .|.|||...::                ||:
 Worm   193 IRLGVSNFGFFEIIISSDAFVEIKPARNFPTR---ENLSDIISKVF----------------LGN 238

  Fly   239 DESARLAADILSFEHELCGGMKGGSFESWDAEEQLYLANYTRKTLREFSNSIELDLDSYVRASFG 303
            .    ...:|.:.|::                            |||:.| ::.:|.|       
 Worm   239 G----FQPNITAIEND----------------------------LREYEN-LQRELKS------- 263

  Fly   304 QDIYKPVYMAAPEYFRQLKRTV-SAHNISLVANYIMYRAVSALNFPLDDRPQLRKRECLERTKEL 367
                             |:|.: :..|.||| ||:::..:.::   :.:..:|.:.:|.....:.
 Worm   264 -----------------LERLIQTTPNRSLV-NYLIFNYLKSV---MLEYKRLPEEQCEGVVIDF 307

  Fly   368 LPTALGELYARQFGTEDGRIDLDNLYDTLKTALRQSL-GAEWLVEGTQRVGQEKLRNLKLQM--- 428
            ||.|...::.:.|..::.|..:..:.:.:|......: .:.||.|.:::|..:|::|:|..:   
 Worm   308 LPRASTRVFVQNFLDKENRKYVAGMIEDVKMGFIDMIQESTWLNEESKKVAVQKVKNIKSMIGYP 372

  Fly   429 PTYERPVILKLQLERGNYWQ--NLRQLLGVVQSQRNNRLFEEFLPA--PTDP------VEAYEAR 483
            ..:|.|..|....:..|..|  :...::..:|...|.:.. ||:.:  |.||      ..|:...
 Worm   373 DFFEPPGTLDRSFKDLNIEQTDSYHTIVRKIQKFTNEQCM-EFVASEIPLDPRQPILHANAFYQN 436

  Fly   484 VRLRPVQRRLDMGLALLQP----PAYDPRYGHAIRYATLGVQLAQQLVMAFDDPHWSVGLLERDN 544
            ...          ||:|.|    |.:|..:...:..|.:|..||.::..|||  |..:      |
 Worm   437 TNF----------LAILAPVLDDPIFDTTFPRYVNLAVIGNVLAHEIGHAFD--HTGI------N 483

  Fly   545 WDG---QTAW-------QYHIRSNCFARQVDNYLRP------NVSATT-QLITDSAAINVAFRAY 592
            :|.   |..|       :|..|..|..||.|.|..|      |.|.|. ::..|...:..|:|.:
 Worm   484 YDDAGQQRIWLTPEDSEEYGKRLRCLLRQHDEYDDPDFGRNLNGSKTLHEISADRFGVEAAWRTF 548

  Fly   593 LTW--------LGFQEPNNDFTKLTKETLPDLNYSNTALFFLAYAQEHCSLEEARPRDEQGTPEG 649
            ...        :|||                 |::...|:|...|...|     |.||.....  
 Worm   549 KKLDLSNESEIVGFQ-----------------NFNIDQLYFRTAALIWC-----RQRDTTDLQ-- 589

  Fly   650 YLYSARQNHTWTRLLVNGPLRNSVEFASEFRCPIGSPMNPASKCIIY 696
              |:.::.|......|||...|..:||..|.||:||||||..||.::
 Worm   590 --YALQREHPTNNFRVNGIYANMPQFAETFNCPLGSPMNPKKKCDLF 634

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nepl14NP_651097.1 M13 60..693 CDD:341056 145/691 (21%)
nep-3NP_494679.2 M13 82..631 CDD:341056 145/691 (21%)

Return to query results.
Submit another query.