DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nepl13 and goe

DIOPT Version :9

Sequence 1:NP_651096.1 Gene:Nepl13 / 42699 FlyBaseID:FBgn0039022 Length:741 Species:Drosophila melanogaster
Sequence 2:NP_001285350.1 Gene:goe / 32660 FlyBaseID:FBgn0027528 Length:879 Species:Drosophila melanogaster


Alignment Length:746 Identity:143/746 - (19%)
Similarity:261/746 - (34%) Gaps:220/746 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 YMNLSADPCTDFFEYACGQWGRYH--------KR-QLRPDELSTAQQLMETKISEQLQQLLTQPL 118
            :.|.|..||.:.:|:|||.:...:        || :...:..:..|:|.|  ::..:..|     
  Fly   178 WANTSKSPCHETYEWACGNFASDYANHEYFVIKRGEWNYETYNEYQELNE--LNRFIAML----- 235

  Fly   119 PPQHHPNGYSGASMTNVRKVRAFYESCVAVEANASERRRFLMK----------ILKDNGGLRNVP 173
                 ||...|:..:.   |.:.|.||...:.....:...|:|          ..:|:..|:   
  Fly   236 -----PNSQEGSVEST---VSSLYRSCRETDVLDKSQSDLLLKRAINAVYGWQAFRDSNRLQ--- 289

  Fly   174 NSNWQHNRQWVQTLGELRRNYGLDILLGLEIDLNLQTMKGNTIYFGEPKLTIIPAEHCNALATRG 238
              :|::.|    .|..|:..:|:.....:.::..........|...|.:|. :|.::     ..|
  Fly   290 --SWEYKR----VLVVLQAKHGIFPYYRVTVENGFSNPHDYVITLDEGELG-LPDKY-----FYG 342

  Fly   239 AQVRDEV---YELVQQQVTENLRDW---FGMDTGEAARFAGDIIRFEFELCK------------- 284
            ....:||   |:|:       |||:   .|:.:.||..||.||..:|..:..             
  Fly   343 NDADEEVVRGYKLL-------LRDFAINMGIVSREADLFADDIFHYERRIVNHIEDAKADANRPI 400

  Fly   285 ----QMGEQDIQKPEEEFPPAIQAQIYGARSRTGQERLRRQK------------------GGMTL 327
                ::.:..|:.|......::||.....:.....|.|.|..                  ....:
  Fly   401 NKLMRLADLKIKAPSLPILESLQAIFPKTKITEDTEVLVRDPEVMHALSVLLSTSDKKPINNFIV 465

  Fly   328 TELTSEMGNHL--DFKMLVEVILESQYPSQVYLRSPEYVKHVVRTVKANNRITVGGYILYVALNE 390
            ..|..:|..||  :::.|.|.     :...:|.|:..|.:.::.:....:       .|..|::.
  Fly   466 WSLARKMLPHLSKEYRTLAET-----FDHALYGRTASYPRWLICSKVVRD-------WLPFAVDA 518

  Fly   391 LNQPPEEAPSQRARQCVQVTQRLFPQVLGEMFQRHVQRDNAKHDL-----DAVFNDVIKALEEQF 450
            |.|.|   |.|   |...:|.:          .|.:.:.....:|     .::.|.:..:||:  
  Fly   519 LQQQP---PRQ---QFETMTSK----------SRGLNKTQGNEELLKLMFFSLRNQLKDSLEQ-- 565

  Fly   451 HVEWMDENDRRAARTRLSQYRV--SLPD------------YQSLDLTDLQF-QKSEDYW--RRLE 498
             .:|::...|:..:.:|::.|:  .:||            |..|.|.::.| :..|..|  ||.:
  Fly   566 -AKWLEPAARQFIQKKLNEMRLQFGIPDEVLQQPTYLAQYYNELILNNVFFVEHLEWIWTFRRSQ 629

  Fly   499 IALKYRSHQQFEALRGNDFGQDADGLDAFEVRAALSPRQQMVLVGWGLLQAPYYNYYYPKSLKYA 563
            :..|.......:.:....:.:|.....|:      |.:..|:||...|:.:.||:|.||.::.:|
  Fly   630 MEKKLGPLAILDVIVSEMYTRDNPQAIAY------SNKLNMLLVSKVLISSNYYDYRYPVAVNFA 688

  Fly   564 LLGHRLASALVQAFDD--EGWNNH--------------------------PQATAQWNE------ 594
            .:|..:..||:..|..  ..:|..                          |:...:.||      
  Fly   689 RIGTDILEALIDNFSTFLLQFNTQSTDISDAAPEIRYAQPDVNCLAAGQPPRLVHELNELSSNAL 753

  Fly   595 ----VTMSGYRNASECQRAQYSSYLYNEPGEFRNATRLREIIADGSGLNLAFNAYLAWLEQQDHK 655
                ||:|..|.|:..        |.|    |.||......| .|||::.| |.|.|.  ....:
  Fly   754 KSFHVTLSAARTAARA--------LSN----FVNAIDAGSAI-QGSGIDQA-NTYEAL--GLTRR 802

  Fly   656 LR-PLLAKETLSELNFTNTQLFFIYFAQTRC 685
            || |.|.       :|...:||.:.:.|..|
  Fly   803 LRIPGLR-------SFNENELFTLSYMQQHC 826

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nepl13NP_651096.1 PepO 63..732 CDD:226118 143/746 (19%)
M13 68..738 CDD:189000 141/741 (19%)
goeNP_001285350.1 GluZincin 184..>694 CDD:301352 107/583 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45469672
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3590
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11733
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

Return to query results.
Submit another query.