DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nepl13 and nep-2

DIOPT Version :9

Sequence 1:NP_651096.1 Gene:Nepl13 / 42699 FlyBaseID:FBgn0039022 Length:741 Species:Drosophila melanogaster
Sequence 2:NP_494343.2 Gene:nep-2 / 188090 WormBaseID:WBGene00020230 Length:736 Species:Caenorhabditis elegans


Alignment Length:825 Identity:182/825 - (22%)
Similarity:325/825 - (39%) Gaps:189/825 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 RATRSAWLGFLLELLLLFEIQLCDVTEARQNHMNRMQMSG-------NFPDSREEQLVRQ--KIA 57
            |.|| .|....|.||:||.:.|                 |       |:.||.:..|...  |.|
 Worm    16 RWTR-IWAIIALILLILFLLVL-----------------GAAIYFYINYKDSSDVCLSPGCIKTA 62

  Fly    58 TDVQKYMNLSADPCTDFFEYACGQWGRYHKRQLRPDELSTAQQLMETKISEQLQQLLTQPLPPQH 122
            :.:...||.|.|||.||:|:|||||.:.|.   .||:..:....  ..:.:.|:..|.:.|....
 Worm    63 SVILSSMNSSVDPCDDFYEFACGQWIKGHP---IPDDAPSVSNF--ENLGQDLEFALKELLDEND 122

  Fly   123 HPNGYSGASMTNVRKVRAFYESCVAVEANASERRRFLMKILKDNGGLRNVPNSNWQHNRQWVQTL 187
            .|..|..::   |.|.:.||..|:    |.||        :.||                |..|.
 Worm   123 EPYDYETSA---VGKAKYFYNLCL----NESE--------ILDN----------------WRTTF 156

  Fly   188 GELRRNYGLDILLG--LEIDLNLQTM--------KGNTIYFGEPKLTIIPAEHCNALATRGAQVR 242
            .|:.:::|....||  ::.|.:::.:        |.::::    |.|:.|.:       :.:|  
 Worm   157 DEVVKSFGGWPSLGHQMKPDASIEMLYADMVAKFKADSLF----KATVQPDD-------KNSQ-- 208

  Fly   243 DEVYELVQQQVTENLRDWF----------------------GMDTGEAARFAGDIIRFEFELCK- 284
            ..|..:.|.|:....||::                      ..|...|...|.:||.||..|.. 
 Worm   209 RHVLLIDQPQLNLFARDFYVAAENEERMAYLQLIRDVLILLDADRTRATLDAKEIIDFETALANI 273

  Fly   285 -----------------QMGEQDIQKPEEEFPPAIQAQIYGARSRTGQERLRRQKGGMTLTELTS 332
                             .:||.....|...:|............:.|:.        :|..:.|.
 Worm   274 TMADEHRHDIAELYTKITLGEMRRSLPHFNWPLFFNRMFKDLHEKNGKR--------ITFDDNTE 330

  Fly   333 EMGNHLDFKMLVEVILESQYPSQV---YLRSPEYVKHVVRTVKANNRITVGGYILYVALNELNQP 394
            .:....:|...::|:: .||.:::   ||....:.|.::|.:.....:|:  :..|..||.:|  
 Worm   331 VVVYGYEFLRRLDVLI-PQYDNRLIVNYLEWCWFFKTMLRDLPDPFALTI--FKFYKTLNIMN-- 390

  Fly   395 PEEAPSQRARQCVQVTQRLFPQVLGEMFQRHVQRDNAKHDLDAVFNDVIKALEEQF-----HVEW 454
               ....|...||.....|.|.....::.::.....||..::    ::|..:.|.|     ..:|
 Worm   391 ---VQKVRWHGCVTRINSLMPMATSAIYVKNHFDHEAKQQVE----EMISLIMESFVDLLLSEDW 448

  Fly   455 MDENDRRAARTRLSQY--RVSLPDYQSLDLTDLQFQKSEDYWRRLEIALKYRSHQQ------FEA 511
            :.:..::.|:.::::.  ::..|||    |.|.....:|  ::..::   |..|..      :|.
 Worm   449 LTKETKQTAKQKVNEMKRKIGYPDY----LNDPAAVNNE--YKTFKV---YPGHYYQTKFSFYEQ 504

  Fly   512 LRGNDFGQDADGLD-------AFEVRAALSPRQQMVLVGWGLLQAPYYNYYYPKSLKYALLGHRL 569
            .:.:...:..:.:|       |..|.|..||....::...|:||..:|:..:|.|:.:..:|..:
 Worm   505 YQRDVLERITEAVDRERWVAGAALVNAFYSPNTNEIIFPAGILQPVFYSKDFPSSMNFGGIGVVI 569

  Fly   570 ASALVQAFDDEG--WNNHPQATAQWNEVTMSGYRNASECQRAQYSSYLYNEPG-EFRNATRLREI 631
            ...:...|||.|  ::|.......|:..|:|.:.:.::|...|||||:.::.. :....:...|.
 Worm   570 GHEITHGFDDRGRLYDNLGNIRQWWDNATISKFEHKAQCIEKQYSSYVLDQINMQINGKSTKGEN 634

  Fly   632 IADGSGLNLAFNAYLAWLEQQDHKLRPLLAKETLSELNFTNTQLFFIYFAQTRCWAKDNQDAILD 696
            |||..||..|:.||..:  ::.|...|     .|..:|.|:.||||:.:||..|...::::|| .
 Worm   635 IADNGGLKQAYRAYKKY--EKRHSRPP-----RLPGVNLTHDQLFFLNYAQIWCGTMNDKEAI-R 691

  Fly   697 SMPLMQHTPERWDVNGPLSNSAEFGREFGCALGTPMNSGDKCLVY 741
            .:...:|:|....|.||||||.:|.:.:.|..|:.||..:||.|:
 Worm   692 KLRTSEHSPGPIRVKGPLSNSYDFAKAYNCEPGSQMNPREKCRVW 736

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nepl13NP_651096.1 PepO 63..732 CDD:226118 160/744 (22%)
M13 68..738 CDD:189000 159/745 (21%)
nep-2NP_494343.2 PepO 61..736 CDD:226118 165/760 (22%)
M13 73..734 CDD:189000 160/746 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3590
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D282463at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11733
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

Return to query results.
Submit another query.