DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nepl13 and nep-18

DIOPT Version :9

Sequence 1:NP_651096.1 Gene:Nepl13 / 42699 FlyBaseID:FBgn0039022 Length:741 Species:Drosophila melanogaster
Sequence 2:NP_494297.1 Gene:nep-18 / 186911 WormBaseID:WBGene00019343 Length:701 Species:Caenorhabditis elegans


Alignment Length:808 Identity:172/808 - (21%)
Similarity:279/808 - (34%) Gaps:228/808 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 SGNFPDSREEQLVRQK---IATDVQKYMNLSADPCTDFFEYACGQ----------WGRYHKRQLR 91
            |.|.|:...|....::   :...::.|.|.|.|||.||||:.||:          ||....:||.
 Worm    16 SSNAPNGSPETCWSKECVGVLAMIKNYQNASVDPCEDFFEHTCGRYSEHVMDDNSWGYVQYKQLL 80

  Fly    92 PDELSTAQQL--METKISEQLQQLLTQPLPPQHHPNGYSGASMTNVRKVRAFYESCVAVEANASE 154
            ....:.|::.  ..:|.:|||                            |.|.:||:..:....:
 Worm    81 YQVFAIARKTNKFNSKPNEQL----------------------------RIFTKSCLDRKEMDED 117

  Fly   155 RRRFLMKILKDNGGLRNVPNSNWQHNRQWVQTLGELRRNYGLDILLGLEIDLNLQTM-------- 211
            ..:.|...:::.||...: :.||...:            :.|..:|...:.:|...|        
 Worm   118 TFQDLRNDIEERGGFPMI-DPNWNEEK------------FDLSDMLAKYLSINRNRMGFLSVEPY 169

  Fly   212 ---KGNTIYFGEPKLTIIPAEHC--------------------NALATRGAQVRDEVY-----EL 248
               :||.   ...:|.:.|..|.                    ..|.....::.:.:|     ||
 Worm   170 AAIEGNK---SVNRLYVSPGPHWVYNWAMGISIYKDSVAFMLRRLLKLENRELNETIYDKEFAEL 231

  Fly   249 VQQQVT-ENLRDWFGM----DTGEAARFAGDIIRF--EFELCKQM--------GEQDIQKPEEEF 298
            ||.:.. ..|.|:..:    |....:|...|:::.  |.:..|.:        .|:|.:|..|  
 Worm   232 VQLEANFSTLADYRNLALDNDNMSKSRNLTDLVKMIPEIDWIKILKALARHGTSEEDEEKLLE-- 294

  Fly   299 PPAIQAQIYGARSRTGQERLRRQKGGMTLTELTSEMGNHLDFKMLVEVILESQYPSQVYLRSPEY 363
                :..::||......|  .|:...:......|.:.|:|..:.|::|.|        |.    |
 Worm   295 ----RVTVHGAGEYFFGE--NRELARIATETPKSALANYLVVRQLIDVAL--------YF----Y 341

  Fly   364 VKHVVRTVKANNRITVGGYILYVALNELNQPPEEAPSQRARQCVQVTQRLFP------------- 415
            .|...|..|..|.:....:                       |.......||             
 Worm   342 DKDQPRQNKFYNHVDQQSF-----------------------CATQVASFFPMPSMNVFIESSQF 383

  Fly   416 -----QVLGEMFQRHVQRDNAKHDLDAVF--NDVIKALEEQFHVEWMDENDRRAARTRLSQYRVS 473
                 :|:.|||.:      .|.:.:.:|  |:.::....:|.:..::..|   .:..|.||...
 Worm   384 KIENLKVIEEMFVK------IKAEYEQIFTENEYLELEIREFLIRKLNAID---GKFGLDQYTEG 439

  Fly   474 LP----DYQSLDL--TDLQFQKSEDYWRRLEIALKYRSHQQFEALRGNDFGQDADGLDAFEVRAA 532
            .|    .|::|:.  ||..:|.....||       :.|.|..|.: .:|...|...|..|...||
 Worm   440 KPLLEKMYETLNFLDTDSPWQVYMKMWR-------HWSEQLVEHI-VHDTPLDPVNLKMFGTHAA 496

  Fly   533 LSPRQQMVLVGWGLLQAPYYNYYYPKSLKYALLGHRLASALVQAFD------DEGWNNHPQATAQ 591
            ..|......:....|..|:.:..:|.:..|..||:.:...:..|||      ||.....    ..
 Worm   497 YQPYPNHFYINLPYLTYPWMDADFPANTNYGYLGYVIGHEIGHAFDHFHRKLDESGRQQ----QY 557

  Fly   592 WNEVTMSG---YRNASECQRAQYSSYLYNEPGE--FRNATRLR-EIIADGSGLNLAFNAYLAWLE 650
            |...|.|.   |....:|.|.|||:  |.|||.  |.|.|..| ||..|..|:..||..: ..::
 Worm   558 WFTETNSSNTEYELREKCLRDQYSA--YKEPGYDFFMNGTHCRYEIAGDHMGIRTAFRVF-EKVK 619

  Fly   651 QQDHKLRPLLAKETLSELNFTNTQLFFIYFAQTRCWAKD--NQDAILDSMPLMQHTPERWDVNGP 713
            ::|        :..|..|..:..||||..:|..:|   |  |.:.:..:|...||...|:.|||.
 Worm   620 KED--------RFRLPGLEMSEEQLFFYNYAFRQC---DVYNPNKLPRNMLARQHPTNRYRVNGV 673

  Fly   714 LSNSAEFGREFGCALGTPMNSGDKCLVY 741
            :.|..||...|.|...:|||...||.:|
 Worm   674 IQNIPEFAEAFNCPKNSPMNPEMKCKLY 701

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nepl13NP_651096.1 PepO 63..732 CDD:226118 162/771 (21%)
M13 68..738 CDD:189000 162/772 (21%)
nep-18NP_494297.1 PepO 42..692 CDD:226118 162/771 (21%)
M13 47..699 CDD:189000 163/773 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3590
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D282463at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11733
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
54.880

Return to query results.
Submit another query.