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Protein Alignment HP1c and cbx6a
DIOPT Version :10
| Sequence 1: | NP_651093.1 |
Gene: | HP1c / 42696 |
FlyBaseID: | FBgn0039019 |
Length: | 237 |
Species: | Drosophila melanogaster |
| Sequence 2: | XP_073792856.1 |
Gene: | cbx6a / 799294 |
ZFINID: | ZDB-GENE-040808-26 |
Length: | 488 |
Species: | Danio rerio |
| Alignment Length: | 69 |
Identity: | 28/69 - (40%) |
| Similarity: | 39/69 - (56%) |
Gaps: | 7/69 - (10%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 8 FVVERIMDKRITSEGKVEYYIKWRGYTSADNTWEPEENCDCPNLIQKFEESRAKS-----KKRGE 67
|..|.|:..|: .:|.:||.:||:|:....:|||||||.....||:.||:...:. ||||
Zfish 11 FAAEAILKSRV-RKGHIEYLVKWKGWALKHSTWEPEENILDDRLIKAFEQKEREQELYGPKKRG- 73
Fly 68 KKPK 71
.|||
Zfish 74 PKPK 77
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| HP1c | NP_651093.1 |
CD_CSD |
8..55 |
CDD:475127 |
19/46 (41%) |
| CSD |
85..135 |
CDD:349275 |
|
| cbx6a | XP_073792856.1 |
None |
|
Blue background indicates that the domain is not in
the aligned region.
|
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