Protein Alignment HP1c and cbx1

DIOPT Version :10

• Sequence 1: NP_651093.1
• Gene: HP1c / 42696
• FlyBaseID: FBgn0039019
• Length: 237
• Species: Drosophila melanogaster
• Sequence 2: NP_001017150.1
• Gene: cbx1 / 549904
• XenbaseID: XB-GENE-1005974
• Length: 184
• Species: Xenopus tropicalis
• Alignment Length: 151
• Identity: 62/151 - (41%)
• Similarity: 100/151 - (66%)
• Gaps: 20/151 - (13%)

  Fly     3 KNEPNFVVERIMDKRITSEGKVEYYIKWRGYTSADNTWEPEENCDCPNLIQKF--------EESR 59
            :.|..:|||:::|:|:. :|||||.:||:|::..|||||||||.|||:||.:|        |..:
 Frog    16 EEEEEYVVEKVLDRRVV-KGKVEYLLKWKGFSDDDNTWEPEENLDCPDLIAEFLQSQKSAYESEK 79

  Fly    60 AKSKKR--------GEK---KPKCEEIQKLRGYERGLELAEIVGATDVTGDIKYLVRWQFCDEFD 113
            .::.||        ||:   |.|.:|::|.||:.||||...|:||||.:|::.:|::|:..||.|
 Frog    80 TEAGKRKADSDTEVGEESKPKKKKDEVEKPRGFARGLEPERIIGATDSSGELMFLMKWKNSDEAD 144

  Fly   114 LVPSAQIVEKDPQMLIDYFQK 134
            |||:.:...|.||::|.::::
 Frog   145 LVPAKEANVKCPQVVISFYEE 165

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HP1c	NP_651093.1	CD_CSD	8..55	CDD:475127	27/46 (59%)
		CSD	85..135	CDD:349275	20/50 (40%)
cbx1	NP_001017150.1	CD_HP1beta_Cbx1	20..69	CDD:349297	28/49 (57%)
		CSD_HP1beta_Cbx1	111..168	CDD:349301	23/55 (42%)