Protein Alignment HP1c and cbx1b

DIOPT Version :10

• Sequence 1: NP_651093.1
• Gene: HP1c / 42696
• FlyBaseID: FBgn0039019
• Length: 237
• Species: Drosophila melanogaster
• Sequence 2: NP_001002090.1
• Gene: cbx1b / 415180
• ZFINID: ZDB-GENE-040625-68
• Length: 203
• Species: Danio rerio
• Alignment Length: 143
• Identity: 58/143 - (40%)
• Similarity: 98/143 - (68%)
• Gaps: 12/143 - (8%)

  Fly     3 KNEPNFVVERIMDKRITSEGKVEYYIKWRGYTSADNTWEPEENCDCPNLIQKFEESRAKSKKRG- 66
            :.|..:|||:::|:|:. :|||||.:||:|::..||||||:||.|||:||.:|.:|:..::..|
Zfish    43 EEEEEYVVEKVLDRRVV-KGKVEYLLKWKGFSDEDNTWEPDENLDCPDLIAEFLQSQKTAESGGK 106

  Fly    67 ----------EKKPKCEEIQKLRGYERGLELAEIVGATDVTGDIKYLVRWQFCDEFDLVPSAQIV 121
                      |.|.:.:|.:||||:.|||:...|:||||.:|::.:|::|:..||.||||:.:..
Zfish   107 RRAETDGDGKETKKRKDEPEKLRGFARGLDPERIIGATDSSGELMFLMKWKNSDEADLVPAKEAN 171

  Fly   122 EKDPQMLIDYFQK 134
            .|.||::|.::::
Zfish   172 VKCPQVVISFYEE 184

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HP1c	NP_651093.1	CD_CSD	8..55	CDD:475127	26/46 (57%)
		CSD	85..135	CDD:349275	19/50 (38%)
cbx1b	NP_001002090.1	CD_HP1beta_Cbx1	47..96	CDD:349297	27/49 (55%)
		CSD_HP1beta_Cbx1	130..187	CDD:349301	22/55 (40%)