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Protein Alignment HP1c and Oxp
DIOPT Version :10
| Sequence 1: | NP_651093.1 |
Gene: | HP1c / 42696 |
FlyBaseID: | FBgn0039019 |
Length: | 237 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_611240.1 |
Gene: | Oxp / 37002 |
FlyBaseID: | FBgn0034255 |
Length: | 84 |
Species: | Drosophila melanogaster |
| Alignment Length: | 60 |
Identity: | 23/60 - (38%) |
| Similarity: | 32/60 - (53%) |
Gaps: | 7/60 - (11%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 8 FVVERIMDKRITSEGKVEYYIKWRGYTSADNTWEPEENC-DCPNLI-----QKFEESRAK 61
::||:.:.||.. .|:.:|..||.||.....||||.||. .|..|| :.|::||.|
Fly 22 YIVEKFLGKRYL-RGRPQYLTKWEGYPIEQCTWEPLENLGKCMTLIADYEAELFQQSREK 80
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| HP1c | NP_651093.1 |
CD_CSD |
8..55 |
CDD:475127 |
19/52 (37%) |
| CSD |
85..135 |
CDD:349275 |
|
| Oxp | NP_611240.1 |
CD_Rhino |
21..71 |
CDD:349280 |
19/49 (39%) |
|
Blue background indicates that the domain is not in
the aligned region.
|
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