Protein Alignment HP1c and Cbx1

DIOPT Version :9

• Sequence 1: NP_651093.1
• Gene: HP1c / 42696
• FlyBaseID: FBgn0039019
• Length: 237
• Species: Drosophila melanogaster
• Sequence 2: XP_006247295.1
• Gene: Cbx1 / 360609
• RGDID: 1310714
• Length: 193
• Species: Rattus norvegicus
• Alignment Length: 160
• Identity: 61/160 - (38%)
• Similarity: 101/160 - (63%)
• Gaps: 29/160 - (18%)

  Fly     3 KNEPNFVVERIMDKRITSEGKVEYYIKWRGYTSADNTWEPEENCDCPNLIQKFEESR-------- 59
            :.|..:|||:::|:|:. :|||||.:||:|::..|||||||||.|||:||.:|.:|:
  Rat    16 EEEEEYVVEKVLDRRVV-KGKVEYLLKWKGFSDEDNTWEPEENLDCPDLIAEFLQSQKTAHETDK 79

  Fly    60 ---------AKSKKRGEK-KPKCE----------EIQKLRGYERGLELAEIVGATDVTGDIKYLV 104
                     :.|:.:||: |||.:          :.:|.||:.||||...|:||||.:|::.:|:
  Rat    80 SDGGKRKADSDSEDKGEESKPKKKKEEALPIWFLQSEKPRGFARGLEPERIIGATDSSGELMFLM 144

  Fly   105 RWQFCDEFDLVPSAQIVEKDPQMLIDYFQK 134
            :|:..||.||||:.:...|.||::|.::::
  Rat   145 KWKNSDEADLVPAKEANVKCPQVVISFYEE 174

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HP1c	NP_651093.1	Chromo	9..58	CDD:278797	28/48 (58%)
		Chromo_shadow	89..134	CDD:279701	18/44 (41%)
Cbx1	XP_006247295.1	Chromo	27..70	CDD:278797	25/43 (58%)
		Chromo_shadow	126..177	CDD:279701	19/49 (39%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG1911
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1628171at2759
OrthoFinder	1	1.000	-	-		FOG0000191
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR22812
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X422
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	9	8.880