Protein Alignment HP1c and Su(var)205

DIOPT Version :10

• Sequence 1: NP_651093.1
• Gene: HP1c / 42696
• FlyBaseID: FBgn0039019
• Length: 237
• Species: Drosophila melanogaster
• Sequence 2: NP_476755.1
• Gene: Su(var)205 / 34119
• FlyBaseID: FBgn0003607
• Length: 206
• Species: Drosophila melanogaster
• Alignment Length: 185
• Identity: 60/185 - (32%)
• Similarity: 100/185 - (54%)
• Gaps: 49/185 - (26%)

  Fly     3 KNEPNFVVERIMDKRITSEGKVEYYIKWRGYTSADNTWEPEENCDCPNLIQKFEESR-------- 59
            :.|..:.||:|:|:|: .:||||||:||:||...:||||||.|.||.:|||::|.||
  Fly    19 EEEEEYAVEKIIDRRV-RKGKVEYYLKWKGYPETENTWEPENNLDCQDLIQQYEASRKDEEKSAA 82

  Fly    60 ---------AKSK--------------KRGEKKPKCEEIQKLR----------------GYERGL 85
                     ||:|              ||..::|......|.:                |::|||
  Fly    83 SKKDRPSSSAKAKETQGRASSSTSTASKRKSEEPTAPSGNKSKRTTDAEQDTIPVSGSTGFDRGL 147

  Fly    86 ELAEIVGATDVTGDIKYLVRWQFCDEFDLVPSAQIVEKDPQMLIDYF-QKMAPYS 139
            |..:|:||:|..|.:.:|::::..|:.::|||:...||.|:|:|.:: ::::.||
  Fly   148 EAEKILGASDNNGRLTFLIQFKGVDQAEMVPSSVANEKIPRMVIHFYEERLSWYS 202

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HP1c	NP_651093.1	CD_CSD	8..55	CDD:475127	27/46 (59%)
		CSD	85..135	CDD:349275	17/50 (34%)
Su(var)205	NP_476755.1	CD_HP1a_insect	24..72	CDD:349300	27/48 (56%)
		CSD_HP1a_insect	146..198	CDD:349305	18/51 (35%)