Protein Alignment HP1c and HP1b

DIOPT Version :10

• Sequence 1: NP_651093.1
• Gene: HP1c / 42696
• FlyBaseID: FBgn0039019
• Length: 237
• Species: Drosophila melanogaster
• Sequence 2: NP_572521.2
• Gene: HP1b / 31834
• FlyBaseID: FBgn0030082
• Length: 240
• Species: Drosophila melanogaster
• Alignment Length: 146
• Identity: 62/146 - (42%)
• Similarity: 92/146 - (63%)
• Gaps: 20/146 - (13%)

  Fly     8 FVVERIMDKRITSEGKVEYYIKWRGYTSADNTWEPEENCDCPNLIQKFEESRAKSKKRGEKK--- 69
            |.|||:.||| |..|:.|||:||:||..::|||||.||.|||:||..||||...:||..:|:
  Fly     4 FSVERVEDKR-TVNGRTEYYLKWKGYPRSENTWEPVENLDCPDLIANFEESLKNNKKETKKRLST 67

  Fly    70 ---PK-------------CEEIQKLRGYERGLELAEIVGATDVTGDIKYLVRWQFCDEFDLVPSA 118
               |:             .||.:||.|:|||||.::|:||||.:|.:.:|::|:..|..||||:.
  Fly    68 SSTPESIRSKRKSFLEDDTEEQKKLIGFERGLEASKILGATDSSGHLMFLMKWKGSDHADLVPAK 132

  Fly   119 QIVEKDPQMLIDYFQK 134
            ....:.||::|.::::
  Fly   133 LANTRCPQVVIQFYEE 148

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HP1c	NP_651093.1	CD_CSD	8..55	CDD:475127	28/46 (61%)
		CSD	85..135	CDD:349275	18/50 (36%)
HP1b	NP_572521.2	CD_HP1_like	3..52	CDD:349281	29/48 (60%)
		CSD	99..150	CDD:349275	18/50 (36%)