Protein Alignment HP1c and Cbx6

DIOPT Version :9

• Sequence 1: NP_651093.1
• Gene: HP1c / 42696
• FlyBaseID: FBgn0039019
• Length: 237
• Species: Drosophila melanogaster
• Sequence 2: XP_006242056.1
• Gene: Cbx6 / 315136
• RGDID: 1307314
• Length: 414
• Species: Rattus norvegicus
• Alignment Length: 116
• Identity: 36/116 - (31%)
• Similarity: 53/116 - (45%)
• Gaps: 28/116 - (24%)

  Fly     8 FVVERIMDKRITSEGKVEYYIKWRGYTSADNTWEPEENCDCPNLIQKFEESRAK-----SKKRGE 67
            |..|.|:.:|| .:|::||.:||:|:....:|||||||.....||..||:...:     .||||
  Rat    11 FAAESIIKRRI-RKGRIEYLVKWKGWAIKYSTWEPEENILDSRLIAAFEQKERERELYGPKKRG- 73

  Fly    68 KKPKCEEIQKLRGYERGLELAEIVGATDVTGDIKYLVRWQFCDEFDLVPSA 118
            .||| ..:.|.|.....|.::::                    .|.:.|||
  Rat    74 PKPK-TFLLKARAQAEALRISDV--------------------HFSVKPSA 103

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HP1c	NP_651093.1	Chromo	9..58	CDD:278797	21/48 (44%)
		Chromo_shadow	89..134	CDD:279701	4/30 (13%)
Cbx6	XP_006242056.1	CHROMO	10..62	CDD:214605	22/51 (43%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1628171at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.920