Protein Alignment HP1c and Cbx5

DIOPT Version :9

• Sequence 1: NP_651093.1
• Gene: HP1c / 42696
• FlyBaseID: FBgn0039019
• Length: 237
• Species: Drosophila melanogaster
• Sequence 2: NP_001100267.1
• Gene: Cbx5 / 300266
• RGDID: 1306619
• Length: 191
• Species: Rattus norvegicus
• Alignment Length: 157
• Identity: 58/157 - (36%)
• Similarity: 95/157 - (60%)
• Gaps: 26/157 - (16%)

  Fly     3 KNEPNFVVERIMDKRITSEGKVEYYIKWRGYTSADNTWEPEENCDCPNLIQKF----------EE 57
            ::|..:|||:::|:|:. :|:|||.:||:|::...||||||:|.|||.||.:|          |.
  Rat    15 EDEEEYVVEKVLDRRMV-KGQVEYLLKWKGFSEEHNTWEPEKNLDCPELISEFMKKYKKMKEGEN 78

  Fly    58 SRAKSKKRGEK--------------KPKCEEIQKL-RGYERGLELAEIVGATDVTGDIKYLVRWQ 107
            ::.:.|..|.|              |.|.|:...: ||:|||||..:|:||||..||:.:|::|:
  Rat    79 NKPREKSEGNKRKSSFSNSADDIKSKKKREQSNDIARGFERGLEPEKIIGATDSCGDLMFLMKWK 143

  Fly   108 FCDEFDLVPSAQIVEKDPQMLIDYFQK 134
            ..||.|||.:.:...|.||::|.::::
  Rat   144 DTDEADLVLAKEANVKCPQIVIAFYEE 170

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HP1c	NP_651093.1	Chromo	9..58	CDD:278797	26/58 (45%)
		Chromo_shadow	89..134	CDD:279701	18/44 (41%)
Cbx5	NP_001100267.1	CD_HP1alpha_Cbx5	19..68	CDD:349298	25/49 (51%)
		CSD_HP1alpha_Cbx5	116..173	CDD:349302	24/55 (44%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG1911
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1628171at2759
OrthoFinder	1	1.000	-	-		FOG0000191
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR22812
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X422
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	9	8.880