Protein Alignment HP1c and Cbx3

DIOPT Version :9

• Sequence 1: NP_651093.1
• Gene: HP1c / 42696
• FlyBaseID: FBgn0039019
• Length: 237
• Species: Drosophila melanogaster
• Sequence 2: NP_001008314.2
• Gene: Cbx3 / 297093
• RGDID: 1549705
• Length: 183
• Species: Rattus norvegicus
• Alignment Length: 146
• Identity: 63/146 - (43%)
• Similarity: 95/146 - (65%)
• Gaps: 17/146 - (11%)

  Fly     5 EP-NFVVERIMDKRITSEGKVEYYIKWRGYTSADNTWEPEENCDCPNLIQKFEES-RAKSKKRGE 67
            || .||||:::|:|:.: |||||::||:|:|.||||||||||.|||.||:.|..| :|..:|.|.
  Rat    26 EPEEFVVEKVLDRRVVN-GKVEYFLKWKGFTDADNTWEPEENLDCPELIEAFLNSQKAGKEKDGT 89

  Fly    68 K--------------KPKCEEIQKLRGYERGLELAEIVGATDVTGDIKYLVRWQFCDEFDLVPSA 118
            |              |.|.:...|.||:.|||:...|:||||.:|::.:|::|:..||.|||.:.
  Rat    90 KRKSLSDSESDDSKSKKKRDAADKPRGFARGLDPERIIGATDSSGELMFLMKWKDSDEADLVLAK 154

  Fly   119 QIVEKDPQMLIDYFQK 134
            :...|.||::|.::::
  Rat   155 EANMKCPQIVIAFYEE 170

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HP1c	NP_651093.1	Chromo	9..58	CDD:278797	30/48 (63%)
		Chromo_shadow	89..134	CDD:279701	17/44 (39%)
Cbx3	NP_001008314.2	CD_HP1gamma_Cbx3	29..78	CDD:349299	31/49 (63%)
		CSD_HP1gamma_Cbx3	116..173	CDD:349303	21/55 (38%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166336694
Domainoid	1	1.000	78	1.000	Domainoid score	I8568
eggNOG	1	0.900	-	-		E1_KOG1911
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1628171at2759
OrthoFinder	1	1.000	-	-		FOG0000191
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X422
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	9	8.710