DRSC/TRiP Functional Genomics Resources

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Protein Alignment HP1c and set-31

DIOPT Version :9

Sequence 1:NP_651093.1 Gene:HP1c / 42696 FlyBaseID:FBgn0039019 Length:237 Species:Drosophila melanogaster
Sequence 2:NP_506569.1 Gene:set-31 / 179939 WormBaseID:WBGene00007615 Length:503 Species:Caenorhabditis elegans


Alignment Length:294 Identity:57/294 - (19%)
Similarity:99/294 - (33%) Gaps:104/294 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 FVVERIMDKRITSEGK-VEYYIKWRGYTSADNTWEPEENCDCPNLIQKFEESRAKSKKRGEKKPK 71
            :.|:.|:..||  ||: ::|.:||..:...| |.|.|....|...:..:.....||         
 Worm    45 YEVQDIVRSRI--EGREIQYTVKWTNWNGGD-TEEAERRLVCTEKLMGYAARTLKS--------- 97

  Fly    72 CEEIQKLRGYERGLELA--------------EIVGATDVTG-DIKYLVR---------WQFCDEF 112
             ..:..|..:.|.|:.|              .||....|.| .:|::.|         .::..|.
 Worm    98 -SYVTNLDFFLRNLDTALSDLVFFTNTLIPLSIVAEATVFGSSVKFVTRDNIGAKIMYLKYIKEH 161

  Fly   113 D--------LVPSAQIVEKDPQMLIDYFQKMAPYSRHI--------------------------A 143
            :        |||.   :::.....|.|.::| .|.|.|                          .
 Worm   162 NQMHLLHSFLVPQ---IDRVNSSHIQYDKEM-KYQRQIFEDYPFVKIFYPTKKQSVLFPPPPLPN 222

  Fly   144 MRMKGVPEELRLAASRTSYPH------ISSAPVEVPPEVDQSAELAGHLGGIAPQVDQAPQHHAP 202
            :..:.|.||  :..:|.::||      |.:....|.|.:|:..        .|....|.|::...
 Worm   223 ILFEPVTEE--MYKNRENFPHFFPRKGIKAGFNNVRPFIDRLY--------FAKDESQQPKYLKE 277

  Fly   203 MDLANDTDDLASVS------YSIPV-----PGVG 225
            :| .|..:.:..::      :|||:     ||.|
 Worm   278 VD-ENKYEGMRRINKAVNSRFSIPLEMRQEPGSG 310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HP1cNP_651093.1 Chromo 9..58 CDD:278797 14/49 (29%)
Chromo_shadow 89..134 CDD:279701 12/62 (19%)
set-31NP_506569.1 CHROMO 44..90 CDD:214605 14/47 (30%)
SET 299..425 CDD:214614 5/12 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160161954
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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