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Protein Alignment HP1c and cec-5
DIOPT Version :10
| Sequence 1: | NP_651093.1 |
Gene: | HP1c / 42696 |
FlyBaseID: | FBgn0039019 |
Length: | 237 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_001370694.1 |
Gene: | cec-5 / 177537 |
WormBaseID: | WBGene00017993 |
Length: | 374 |
Species: | Caenorhabditis elegans |
| Alignment Length: | 80 |
Identity: | 24/80 - (30%) |
| Similarity: | 42/80 - (52%) |
Gaps: | 14/80 - (17%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 5 EPNFVVERIMDKRIT-SEGKVEYYIKWRGY---TSADNTWEPEENCDCPNLIQKFEES------- 58
:.:|.||:|:..|.: .:.|..:.:.|||| .|....|| .|..:|.:|::.:::|
Worm 112 DEDFAVEKIIAHRFSGKKNKPLFLVMWRGYPNPVSHSEMWE-NELSNCKDLLEAYKDSHDMKPPP 175
Fly 59 -RAKSKKRGEKK-PK 71
:..:||:|.|| ||
Worm 176 VKKSNKKKGSKKSPK 190
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| HP1c | NP_651093.1 |
CD_CSD |
8..55 |
CDD:475127 |
16/50 (32%) |
| CSD |
85..135 |
CDD:349275 |
|
| cec-5 | NP_001370694.1 |
CD_CSD |
115..167 |
CDD:475127 |
16/52 (31%) |
|
Blue background indicates that the domain is not in
the aligned region.
|
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