DRSC/TRiP Functional Genomics Resources

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Protein Alignment HP1c and W05F2.8

DIOPT Version :9

Sequence 1:NP_651093.1 Gene:HP1c / 42696 FlyBaseID:FBgn0039019 Length:237 Species:Drosophila melanogaster
Sequence 2:NP_001249353.1 Gene:W05F2.8 / 13179739 WormBaseID:WBGene00195045 Length:132 Species:Caenorhabditis elegans


Alignment Length:76 Identity:21/76 - (27%)
Similarity:31/76 - (40%) Gaps:22/76 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 KRITSEGKVEYYIKWRGYTSADNTWEPEENCDCPNL--------IQKFEESRAKSKKRGEKKPKC 72
            ||| ||||.:..|   |...||:.|        |.:        .::.|..|.|..|..:.....
 Worm     6 KRI-SEGKKKRLI---GEDDADDEW--------PEMPPGHRILTTEEHEMQRRKESKISQDVEMT 58

  Fly    73 E--EIQKLRGY 81
            |  ::||:|.:
 Worm    59 EAFDLQKMREF 69

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HP1cNP_651093.1 Chromo 9..58 CDD:278797 14/49 (29%)
Chromo_shadow 89..134 CDD:279701
W05F2.8NP_001249353.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1911
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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