Protein Alignment HP1c and Cbx1

DIOPT Version :9

• Sequence 1: NP_651093.1
• Gene: HP1c / 42696
• FlyBaseID: FBgn0039019
• Length: 237
• Species: Drosophila melanogaster
• Sequence 2: NP_001349489.1
• Gene: Cbx1 / 12412
• MGIID: 105369
• Length: 185
• Species: Mus musculus
• Alignment Length: 152
• Identity: 62/152 - (40%)
• Similarity: 100/152 - (65%)
• Gaps: 21/152 - (13%)

  Fly     3 KNEPNFVVERIMDKRITSEGKVEYYIKWRGYTSADNTWEPEENCDCPNLIQKFEESR-------- 59
            :.|..:|||:::|:|:. :|||||.:||:|::..|||||||||.|||:||.:|.:|:
Mouse    16 EEEEEYVVEKVLDRRVV-KGKVEYLLKWKGFSDEDNTWEPEENLDCPDLIAEFLQSQKTAHETDK 79

  Fly    60 ---------AKSKKRGEK---KPKCEEIQKLRGYERGLELAEIVGATDVTGDIKYLVRWQFCDEF 112
                     :.|:.:||:   |.|.||.:|.||:.||||...|:||||.:|::.:|::|:..||.
Mouse    80 SEGGKRKADSDSEDKGEESKPKKKKEESEKPRGFARGLEPERIIGATDSSGELMFLMKWKNSDEA 144

  Fly   113 DLVPSAQIVEKDPQMLIDYFQK 134
            ||||:.:...|.||::|.::::
Mouse   145 DLVPAKEANVKCPQVVISFYEE 166

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HP1c	NP_651093.1	Chromo	9..58	CDD:278797	28/48 (58%)
		Chromo_shadow	89..134	CDD:279701	18/44 (41%)
Cbx1	NP_001349489.1	CD_HP1beta_Cbx1	20..69	CDD:349297	28/49 (57%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	63..124		19/60 (32%)
		CSD_HP1beta_Cbx1	112..169	CDD:349301	23/55 (42%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG1911
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1628171at2759
OrthoFinder	1	1.000	-	-		FOG0000191
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR22812
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X422
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	8	7.880