DRSC/TRiP Functional Genomics Resources

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Protein Alignment HP1c and cbx7b

DIOPT Version :10

Sequence 1:NP_651093.1 Gene:HP1c / 42696 FlyBaseID:FBgn0039019 Length:237 Species:Drosophila melanogaster
Sequence 2:XP_021335969.1 Gene:cbx7b / 101882803 ZFINID:ZDB-GENE-110613-2 Length:239 Species:Danio rerio


Alignment Length:72 Identity:31/72 - (43%)
Similarity:42/72 - (58%) Gaps:7/72 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 EPNFVVERIMDKRITSEGKVEYYIKWRGYTSADNTWEPEENCDCPNLIQKFEESRAKS-----KK 64
            |..|.||.|..||: .:|.|||.:||:|:....:||||||:...|.|:..:||...|.     :|
Zfish     8 EQVFAVESITKKRV-RKGHVEYLLKWKGWPPKYSTWEPEEHILDPRLVLAYEEKEQKERSVVWRK 71

  Fly    65 RGEKKPK 71
            || :|||
Zfish    72 RG-RKPK 77

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HP1cNP_651093.1 CD_CSD 8..55 CDD:475127 21/46 (46%)
CSD 85..135 CDD:349275
cbx7bXP_021335969.1 CD_Cbx7 7..62 CDD:349293 24/54 (44%)
CBX7_C 197..228 CDD:465385
Blue background indicates that the domain is not in the aligned region.

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