DRSC/TRiP Functional Genomics Resources

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Protein Alignment vret and Tudor1

DIOPT Version :10

Sequence 1:NP_651092.1 Gene:vret / 42695 FlyBaseID:FBgn0263143 Length:691 Species:Drosophila melanogaster
Sequence 2:NP_001154697.2 Gene:Tudor1 / 830626 AraportID:AT5G07350 Length:1007 Species:Arabidopsis thaliana


Alignment Length:608 Identity:130/608 - (21%)
Similarity:209/608 - (34%) Gaps:171/608 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 WSAFDP---MSREYYDQVGNRYTNE-----SGQKLIMEAPLPP--KDEKEQRATRQA-KYPYLVV 63
            |:.:.|   .|:..:||   .:|.:     ||..||:.....|  ....|:|....: :.|.:..
plant   362 WANYVPPATNSKAIHDQ---NFTGKVVEVVSGDCLIVADDAVPFGSPAAERRVCLSSIRSPKMGN 423

  Fly    64 P----KSSPYVTEK---MLINFFGRALIKEMEF-RRLSRVYFVYFENIASLETAQQRVQRY---- 116
            |    |.:||..|.   :.....|:.:|.:||: |::::         ....|......|:    
plant   424 PRREEKPAPYAREAREFLRQRLIGKQVIVQMEYSRKVTQ---------GDGPTTSGAADRFMDFG 479

  Fly   117 ----PNLIKCITGRPQKEREITSDPVTSTEPMPTPGPAISATERTPVNHNREVPISTGGQ--NHP 175
                |:..|.           .||.||:     .|..||:.::...||....|.:...|.  .|.
plant   480 SVFLPSAAKA-----------DSDEVTA-----PPAAAIAGSQPVGVNIAELVLVRGFGNVVRHR 528

  Fly   176 EFFRPPLVTKDDY-------------KRGSLLATNDPIQRYLNVKYEFALERHD-IYKLKDETRI 226
            :|..    ..:.|             |:|...|...|.....::....|.:..| :..|:...||
plant   529 DFEE----RSNHYDALLAAEARALAGKKGIHSAKESPAMHITDLTVSAAKKAKDFLPSLQRIRRI 589

  Fly   227 PQVVLHFRSGRT----IPLSTVAV----------------TEED---KTKSLLEDGVSKCVVCQN 268
            |.||.:..||..    ||..|.::                :||.   ..:.:::..|...|...:
plant   590 PAVVEYVLSGHRFKLYIPKITCSIAFSFSGVRCPGRGEPYSEEAISVMRRRIMQRDVEIEVETVD 654

  Fly   269 WTDTF-----------------CKLCKMPFCNASCFAD-VAEQHKQACGKGEILNLDEKVGRKYP 315
            .|.||                 ..|.||   ..|..|| :||.|.....:....|...|:...|.
plant   655 RTGTFLGSMWESRTNVATVLLEAGLAKM---QTSFGADRIAEAHLLEQAERSAKNQKLKIWENYV 716

  Fly   316 KPGLPPSGS------------KVRITAFEQTNVVYVRS------ADIQIDIAYYTVLTEVMMLGK 362
            :.....:|:            ||.:|........||:|      |.||..:|..::        |
plant   717 EGEEVSNGNTNTVETRQKETLKVVVTEVLGGGRFYVQSAGDQKIASIQNQLASLSI--------K 773

  Fly   363 DASKLQS-TPVCGQIVLYKF--EGHMSRAMVLN-----VDNIKEIYVVF-IDFGSVE------VT 412
            ||..:.| .|..|.|||.:|  :...:|||::.     |.:..|.:.|| ||:|:.|      :.
plant   774 DAPIIGSFNPKRGDIVLAQFSLDNSWNRAMIVTAPRAAVQSPDEKFEVFYIDYGNQETVPYSAIR 838

  Fly   413 QLERLYECSSYLAGLTCYPVAVKLRGVPRRFVGPNIREVMYELDQSLVFNIKYSSREYDTSKGMQ 477
            .::.....:..||.| |....:|:..:...| ||...|.::.:........|....|.|||.|..
plant   839 PIDPSVSAAPGLAQL-CRLAYIKVPSLEDDF-GPEAGEYLHTVTLGSGKEFKAVIEERDTSGGKV 901

  Fly   478 ---------VVVMTEIDINRSLN 491
                     ||.:..:|...|:|
plant   902 KGQGTGTEFVVTLIAVDDEISVN 924

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vretNP_651092.1 TUDOR 322..438 CDD:425754 37/148 (25%)
Tudor_vreteno-like_rpt1 371..424 CDD:410515 17/66 (26%)
TUDOR 524..640 CDD:425754
Tudor_vreteno-like_rpt2 576..631 CDD:410516
Tudor1NP_001154697.2 SNc 37..151 CDD:469627
SNc 186..364 CDD:469627 1/1 (100%)
SNc 378..556 CDD:469627 40/209 (19%)
SNc 587..712 CDD:469627 28/127 (22%)
Tudor_AtTudor1-like 747..862 CDD:410514 33/123 (27%)
SNc 860..968 CDD:469627 16/66 (24%)
Blue background indicates that the domain is not in the aligned region.

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