DRSC/TRiP Functional Genomics Resources

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Protein Alignment vret and TDRD1

DIOPT Version :10

Sequence 1:NP_651092.1 Gene:vret / 42695 FlyBaseID:FBgn0263143 Length:691 Species:Drosophila melanogaster
Sequence 2:NP_942090.1 Gene:TDRD1 / 56165 HGNCID:11712 Length:1189 Species:Homo sapiens


Alignment Length:99 Identity:19/99 - (19%)
Similarity:32/99 - (32%) Gaps:43/99 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly   134 PDEAEHCSTSLCEEENWDDMNEPPYNPQE---------------YC---KRNLIIR--------- 171
            |.|||       |||..::...|....:|               :|   ..:.::|         
Human   160 PAEAE-------EEEEEEEEGGPSQTLEELVLGLAAEVCDDFLFFCGDTHGSFVVRTLLQVLGGT 217

  Fly   172 ---------KATQKTKFQRRQFREAERKRFEMLK 196
                     :.:|.::.||...||.:...||:.|
Human   218 LLESERGKPRGSQSSETQRTSARECKPTDFEVPK 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vretNP_651092.1 TUDOR 322..438 CDD:425754
Tudor_vreteno-like_rpt1 371..424 CDD:410515
TUDOR 524..640 CDD:425754
Tudor_vreteno-like_rpt2 576..631 CDD:410516
TDRD1NP_942090.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..66
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 79..138
zf-MYND 170..206 CDD:460312 3/35 (9%)
Tudor_TDRD1_rpt1 268..396 CDD:410479
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 450..469
Tudor_TDRD1_rpt2 517..598 CDD:410480
TUDOR 715..832 CDD:425754
Tudor_TDRD1_rpt4 944..1059 CDD:410482
Blue background indicates that the domain is not in the aligned region.

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