DRSC/TRiP Functional Genomics Resources

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Protein Alignment vret and RNF17

DIOPT Version :10

Sequence 1:NP_651092.1 Gene:vret / 42695 FlyBaseID:FBgn0263143 Length:691 Species:Drosophila melanogaster
Sequence 2:XP_011533454.1 Gene:RNF17 / 56163 HGNCID:10060 Length:1699 Species:Homo sapiens


Alignment Length:86 Identity:20/86 - (23%)
Similarity:29/86 - (33%) Gaps:29/86 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 PDRGQIQSFMYPIGCPANPLMDSTL-VPSDQGVTGGLMDNTLVLSDQSVAAGLIDSTMVPSGTGI 133
            |.|   :|..:|:.|....:..:.. .||||             |||.:...|.....:|     
Human     3 PSR---RSLPFPLNCQLARVGTADYGSPSDQ-------------SDQQLDCALDLMRRLP----- 46

  Fly   134 PDEAE-------HCSTSLCEE 147
            |.:.|       ....||||:
Human    47 PQQIEKNLSDLIDLVPSLCED 67

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vretNP_651092.1 TUDOR 322..438 CDD:425754
Tudor_vreteno-like_rpt1 371..424 CDD:410515
TUDOR 524..640 CDD:425754
Tudor_vreteno-like_rpt2 576..631 CDD:410516
RNF17XP_011533454.1 RING_Ubox <74..101 CDD:473075
Tudor_TDRD4_rpt1 492..568 CDD:410485
Tudor_TDRD4_rpt2 730..874 CDD:410486
Tudor_TDRD4_rpt3 1021..1102 CDD:410487
Tudor_TDRD4_rpt4 1305..1372 CDD:410488
Tudor_TDRD4_rpt5 1553..1657 CDD:410489
Blue background indicates that the domain is not in the aligned region.

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