DRSC/TRiP Functional Genomics Resources

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Protein Alignment vret and tdrd5

DIOPT Version :10

Sequence 1:NP_651092.1 Gene:vret / 42695 FlyBaseID:FBgn0263143 Length:691 Species:Drosophila melanogaster
Sequence 2:NP_001038315.1 Gene:tdrd5 / 557999 ZFINID:ZDB-GENE-050208-502 Length:905 Species:Danio rerio


Alignment Length:754 Identity:125/754 - (16%)
Similarity:237/754 - (31%) Gaps:273/754 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 YDQVGN---RYTNESGQKLIMEAPLPPKDEKEQRATRQAKYPYLVV--PKSSPYVTE-------- 72
            |...||   :...:...|.|.|.....:|.|.:...|:.|..|..:  |:..|.:..        
Zfish    67 YQLDGNIILKAIGDDTTKGIEELVSKQRDHKPKPNNRKGKPGYFNISYPRLQPVILPRRGQAKPA 131

  Fly    73 ---------KMLINFFGRALIKEMEFRRLSR-------VYFVYFENIASLETA-------QQRVQ 114
                     |.|:: .|...:.|:|.|.:::       ..:.:|.....|..|       |.|..
Zfish   132 LPAHLRSQLKQLLS-HGPVRLSELESRYVAQFGKPLNVTQYGFFSISEMLSAAMDFIIMQQSRTG 195

  Fly   115 RYPNLIKCITGRPQKEREITSDPVTSTEPMP-----TPGPAISATERTPVNHNREVPISTGGQNH 174
            ....|...:|.:.|.|..:....:.||.|..     :| .|.|..||.|     ||.:.....:.
Zfish   196 SQLLLRSAVTPQNQPENLMRRFSMQSTSPKQRLAGFSP-KASSLPERRP-----EVSLDPSSVSK 254

  Fly   175 PEFFRPPLVTKDDYKRGSLLATNDPIQRYLNVKYEFALERHDIYKLKDETRIPQVVLHFRSGRTI 239
            ||                            .||.|.:.| ..::||::|.|              
Zfish   255 PE----------------------------PVKEEQSFE-ETVFKLEEELR-------------- 276

  Fly   240 PLSTVAVTEEDKTKSLLEDGVSKCVVCQNWTDTFCKLCKMPFCNASCFADVAEQHKQACGKGEIL 304
                         :.:||.|.:                          ..|:::.|:        
Zfish   277 -------------QQILEKGTA--------------------------GTVSQELKE-------- 294

  Fly   305 NLDEKVGRKYPKPGLPPSGSKVRITAFEQTNVVYVRSADIQIDIAYYTVLTEVM-MLGKDASKLQ 368
                                |:|....|..|           .|:.:.:.||.. |.|::....|
Zfish   295 --------------------KLRKVVAENGN-----------GISIHNLPTEYQRMHGEELPVSQ 328

  Fly   369 STPVCGQIVLYKFEGHMSRAMVL--NVDNIKEIYVVFIDFGSVEVTQLERLYECSSYLA---GLT 428
                ||.:.:.:..|.:|..:.:  ..|..:..::| ::|..:: ||     .|...|:   |.|
Zfish   329 ----CGFLSVTEMVGALSDTLAIQRGTDESESHWMV-VEFKPID-TQ-----PCEPELSPGDGTT 382

  Fly   429 CYPVAVKLRGVPRRFVGPNIREVMYELDQSLVFNIKYSSREYDTSKGMQVVVMTEIDI---NRSL 490
            ..|..                |:.....::..|:...|:.|::.::.:.....::.::   |:::
Zfish   383 SSPTG----------------ELQNPSSRAFYFSCPESAWEHEETEPLTDSQESDAELRVANKTI 431

  Fly   491 NRLFKTILTPVEPSVSDLGYKEDCLPYIPLHCGK----------NINVVVMDNTFIQCGFIYCTS 545
            :::..  |.| |..||    :...:|...:.|.|          .:..|:::.|.....|.    
Zfish   432 HQMVN--LFP-ELMVS----RVSAVPLDAVRCQKLKPPVHRKERELLPVLVEQTESPSYFY---- 485

  Fly   546 IDLAYEVTKMQRDIQEYGEKIAKCATYAPPINE--------------LCIAKYEGKWRRGLSVEL 596
              :.:...|..|.::....::..|.:| |.:.|              .|:|..:..:.|.:..|:
Zfish   486 --IRFSQNKEARALENMMIEMRSCYSY-PDVAERYRLPDAYVRPGQVCCVAPRDMWFYRVVIHEV 547

  Fly   597 VGDGYPSILFIDYGNIVPTHVTDIRPYPPQFI------FPIMTTQLDLIGVPEKPTDEQIKWLDK 655
            ..:....:.::|||:|     |.:..:..:|:      .|.......|.||  :|       :..
Zfish   548 FSETEVKVYYVDYGDI-----TKVERHSLRFLKACYADLPAQAVPAMLAGV--RP-------ITN 598

  Fly   656 NYPIGSVI----TCSEITFDEETNSYSTRIEKLQEFLSL 690
            .:|..:|.    .|.|.|.....:||.      ::||.|
Zfish   599 IWPASAVSCFQRLCCERTLVAGVHSYQ------EDFLLL 631

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vretNP_651092.1 TUDOR 322..438 CDD:425754 24/121 (20%)
Tudor_vreteno-like_rpt1 371..424 CDD:410515 10/54 (19%)
TUDOR 524..640 CDD:425754 22/145 (15%)
Tudor_vreteno-like_rpt2 576..631 CDD:410516 11/74 (15%)
tdrd5NP_001038315.1 LOTUS_1_TDRD5 3..97 CDD:193599 7/29 (24%)
LOTUS_2_TDRD5 133..202 CDD:193589 12/69 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 219..264 16/78 (21%)
LOTUS_3_TDRD5 289..364 CDD:193590 17/118 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 368..393 8/45 (18%)
Tudor_TDRD5 474..590 CDD:410490 19/127 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 694..728
Blue background indicates that the domain is not in the aligned region.

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