DRSC/TRiP Functional Genomics Resources

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Protein Alignment vret and Veneno

DIOPT Version :10

Sequence 1:NP_651092.1 Gene:vret / 42695 FlyBaseID:FBgn0263143 Length:691 Species:Drosophila melanogaster
Sequence 2:NP_649797.2 Gene:Veneno / 41000 FlyBaseID:FBgn0037583 Length:642 Species:Drosophila melanogaster


Alignment Length:634 Identity:123/634 - (19%)
Similarity:197/634 - (31%) Gaps:256/634 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   243 TVAVTEEDKTKSLLEDGVSKCVVCQNWTDTFCKLCKMPFCNASCFADVAEQHKQAC--------- 298
            :||..:|      |.....|||.|.|..:..|:.|...:|:..|......:|:..|         
  Fly     6 SVAGADE------LAQAKGKCVHCANAAERVCQRCGDFYCSKHCQRQDWLRHRYICIPLPALVSP 64

  Fly   299 ------------------------------------------------GKGEILNLDEKVGRKYP 315
                                                            |:..|:...:.:....|
  Fly    65 NEYSVFQSDRESTLEGACSLNADKSVVEASPIPLSRSPILPDLQCNNAGRSSIIAAKDDIPVSPP 129

  Fly   316 KPGLPPSGSKVRITAFEQTNVVYVRSADIQIDIAYYTVLTEVMMLGKDASKLQSTPVCGQIVLYK 380
            |..:||||:.|.||.|..:|..|:|.|....:.|:..|..:|..:.....::::.|. .::.|..
  Fly   130 KAIIPPSGAMVYITDFISSNRCYIRDASESAERAFDEVCKKVNTIATLLPRIKNPPP-NRLCLVH 193

  Fly   381 FEGHMSRA-MVLNVDNIKEIYVV---------FIDFGSVEVTQLERLYECSSYLAGLTCYPVAVK 435
            |.|...|| |...:..:..:::|         |.||..:. .:|:.| .|||.|         |:
  Fly   194 FNGMYVRAKMCKKLREVSHLFLVDLGIKHSGPFFDFKDIN-DELKAL-PCSSQL---------VQ 247

  Fly   436 LRGVPRRFVGPNIREVMYELDQSLVFNIKYSSREYDTS----KGMQVV--VMTEID--INRSLNR 492
            |:         |:....|..| .:.||.|:..::|..:    .|:.:|  |.||::  :|..||.
  Fly   248 LK---------NVLNCDYSND-VIAFNSKFVGKKYMATIKKCPGLHLVELVNTEMNFSVNEQLNA 302

  Fly   493 LF----------------------------------------KTILTPVEPSVSD---------- 507
            .|                                        |.:||  :|.|.:          
  Fly   303 FFNSKKLLRNPNSAAENIKSCSLEGPQPSHIDQPIAIPAIECKKMLT--KPEVQNECEEILKQQN 365

  Fly   508 ----------------------LGY-------------------KED-------CLP-------Y 517
                                  ||:                   .||       ||.       .
  Fly   366 SGQIDQSKSTNVLVTEGASNKMLGFIDLADKATKTDQDTAPKPKDEDVKHSLTQCLTPKANYPLQ 430

  Fly   518 IPLHCGKNINVVVMDNTFIQCGFIYCT---------------------SIDL-AYEVTKMQRDI- 559
            :|.| .||:.:.|:..|..|...|..:                     .||| ..:.||..|.| 
  Fly   431 LPNH-KKNLELPVIHKTNAQTNGIVMSKNEHVLKPPFEMRRFSIESKEGIDLIVVDSTKKNRGIF 494

  Fly   560 --------QEYG------EKIAKCATYAPPINELCIAKYEGKWRRGLSVELVGDGYP------SI 604
                    .|:.      .:|..|..|.|.:.|..:|::||.|.||...:::  ..|      .:
  Fly   495 GAFDSTYASEFSALHSRLSEITDCEPYKPVVREYVLARFEGSWYRGKVEQII--VVPRQQTKYRV 557

  Fly   605 LFIDYGNIVPTHVTDIRPYPPQFIFPIMTTQLDLIGVPEKPTDEQIKWL 653
            :::||.|:......|||.||..|..|..|....:...|..|...|:.:|
  Fly   558 MYLDYTNVEDITEMDIRRYPLDFTAPCATNLCVIDEFPHNPNAAQVSYL 606

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vretNP_651092.1 TUDOR 322..438 CDD:425754 32/125 (26%)
Tudor_vreteno-like_rpt1 371..424 CDD:410515 16/62 (26%)
TUDOR 524..640 CDD:425754 37/158 (23%)
Tudor_vreteno-like_rpt2 576..631 CDD:410516 17/60 (28%)
VenenoNP_649797.2 zf-MYND 20..55 CDD:460312 9/34 (26%)
TUDOR 136..250 CDD:425754 32/134 (24%)
TUDOR <519..580 CDD:425754 18/62 (29%)

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