DRSC/TRiP Functional Genomics Resources

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Protein Alignment vret and Tdrd5

DIOPT Version :10

Sequence 1:NP_651092.1 Gene:vret / 42695 FlyBaseID:FBgn0263143 Length:691 Species:Drosophila melanogaster
Sequence 2:NP_001128213.1 Gene:Tdrd5 / 214575 MGIID:2684949 Length:1040 Species:Mus musculus


Alignment Length:619 Identity:110/619 - (17%)
Similarity:189/619 - (30%) Gaps:245/619 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 MSREYYDQVGNRYT-----NESGQKLIMEAP-----------------LPPKDEK-------EQR 51
            :.:||...|||...     ..|..:|:::.|                 :|.:..|       :||
Mouse    31 LEKEYLLMVGNHLPLRILGYRSTMELVLDMPDVVSVCPGGDGTVILKAIPDESTKGIASLVAKQR 95

  Fly    52 ATRQ--------------AKYPYL-VVPKSSPYVTEK----------MLINFFGRALIKEM--EF 89
            .:.:              .:.||. .||...|.|.:.          :|::.|.:|..:..  .|
Mouse    96 RSHKVRNSMPKGRPSICSGRVPYRGRVPPILPAVVKSELKDLLALSPVLLSDFEKAFARRFGRSF 160

  Fly    90 RRLSRVYFVYFE--NIAS--LETAQQRVQRYPNLIKCI--------------------------- 123
            :.:...:...||  |.||  :...|.|......|.|.:                           
Mouse   161 QYMQYGFLSMFEVLNAASDVISVEQTRAGSLLTLKKSVSEDKQRGWPAGKVFTQPFRMKQQGSYS 225

  Fly   124 TGRPQKEREITSDPVTSTEP-----MPTPGPAISATERTPVNHNREV------------PISTGG 171
            ||.|..:... |.|:::.||     .....|..::.|.:.:||..::            .|..||
Mouse   226 TGFPVMKAHF-SQPISNMEPPKQVLSMAKTPTFNSVEASRLNHTEKLNQLESTFKSVIAQIGPGG 289

  Fly   172 QNHPEFFRPPLVTKDDYKRGSLLA------------TNDPIQ-RYLNV-----------KYEFAL 212
            ...||..|........:.:|..::            ...|.| .:|||           :.||:.
Mouse   290 TVDPELKRKIQFVVSKFPQGLFISKLLGEFELTFKEQLSPKQLGFLNVTELVGALSDILRVEFSE 354

  Fly   213 ERHDIYKLKDETR-IPQVVLHFRSGRTIPLSTV---AVTEEDK-------TKSLLEDGVSKCVVC 266
            ||.|:.....:.: :|       ||.  |||:|   .:.:.||       |.||..:.:|...|.
Mouse   355 ERQDLLVFDADLKPLP-------SGG--PLSSVRNSCLVQPDKKTEANPWTSSLSRNSLSTVAVK 410

  Fly   267 QNWTDTFCKLCKMPFCNASCFADVAEQHKQACGKGEILNLDEKVGRKYPKPGL------------ 319
            :...|...|..|.|                          ::|:   |.||.|            
Mouse   411 KTTWDCPLKNQKEP--------------------------EQKI---YKKPNLVVKPLQLQVETN 446

  Fly   320 -------------PPSGSKV----RITAFEQTNVVYVRSADIQIDIAYYTVLTEVMMLGKDASKL 367
                         ||...:.    |:...:.:.:|.|....|.....:|     :.:..:|:|:|
Mouse   447 KPQLSLSVANHDIPPDAVRAKKLCRLPPLDTSTLVGVFVEYIISPSQFY-----IRIYSRDSSEL 506

  Fly   368 QSTPV-----C--GQIVLYKF--------EGHMS-----------RAMVLNVDNIKEIYVVFIDF 406
            ....:     |  .|:|..::        .||:.           |.::..:...||:.|.:.||
Mouse   507 LEDMMIEMRRCYSNQLVSDRYIMPEYFIQPGHLCCVKISEDKWWYRVIIHRILGKKEVEVFYPDF 571

  Fly   407 GSVEVTQLERLYECSSYLAGLTCYPVAVKLRGVP 440
            |::...|       .|.|..|.|....:..:.:|
Mouse   572 GNIGTVQ-------KSSLRFLKCCYTKLPAQAIP 598

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vretNP_651092.1 TUDOR 322..438 CDD:425754 25/145 (17%)
Tudor_vreteno-like_rpt1 371..424 CDD:410515 14/78 (18%)
TUDOR 524..640 CDD:425754
Tudor_vreteno-like_rpt2 576..631 CDD:410516
Tdrd5NP_001128213.1 LOTUS_1_TDRD5 4..98 CDD:193599 12/66 (18%)
LOTUS_2_TDRD5 127..196 CDD:193589 14/68 (21%)
LOTUS_3_TDRD5 292..365 CDD:193590 14/72 (19%)
Tudor_TDRD5 484..601 CDD:410490 23/127 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 857..891
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 912..975
Blue background indicates that the domain is not in the aligned region.

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