DRSC/TRiP Functional Genomics Resources

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Protein Alignment vret and Tdrd6

DIOPT Version :10

Sequence 1:NP_651092.1 Gene:vret / 42695 FlyBaseID:FBgn0263143 Length:691 Species:Drosophila melanogaster
Sequence 2:NP_001154838.1 Gene:Tdrd6 / 210510 MGIID:2679727 Length:2135 Species:Mus musculus


Alignment Length:515 Identity:113/515 - (21%)
Similarity:196/515 - (38%) Gaps:154/515 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   238 TIPLSTVAVTEEDKTKSLLEDGVSKCVVCQNWTDTFCKLCKMPFCNASCFADVAEQHKQACGKGE 302
            |:.||.::..::  |:.:..|   ..::..|:..|      .|.|               |||||
Mouse   732 TVSLSNLSTAQD--TEKVTSD---PSLLMLNFLKT------KPDC---------------CGKGE 770

  Fly   303 ILNLDEKVGRKYPKPGLPPSGSKVRITAFEQTNVVY---VRSAD----IQIDIAYYTVLTEVMML 360
            :     :||          |..:|:::..|.....:   :|:|.    :..||..|...:|....
Mouse   771 L-----EVG----------STVEVKVSHIENPGSFWCQLMRNAQGFRTLMCDIEDYCKSSEPSPY 820

  Fly   361 GKDASKLQSTPVCGQIVLYKFEGHMSRAMVLNVDNIKEIYVVFIDFGSVEVTQLE---------- 415
            ..|      |.||  :......|..|||::....:::.:.|||:|:|..:|...:          
Mouse   821 EGD------TRVC--LAKRTASGRWSRALISGAHSLEHVRVVFVDYGDRDVVSTKDILSVSDVFF 877

  Fly   416 ----RLYECSSY--LAGLTCYPVAVKLRGVPRRFVG--PNIREVMYELDQSLVFNIKYSSREYDT 472
                :.:.||.|  :..:...|.....:.| :.|.|  .:.|:...|| :..||.:  :||..: 
Mouse   878 QVRAQAFRCSLYNLIQPMGENPFVWDEKAV-QAFSGFIDSARQNNLEL-KCTVFAL--ASRHEE- 937

  Fly   473 SKGMQVV-VMTEID------INRSLNRLFKTILTPVEPSVS---------DLGYKEDCLPYI--- 518
             :...|| ::|...      :.:.|.|..|. ..|:||||.         ||....:.|.|:   
Mouse   938 -EWFNVVDLLTPFQSACRFLVEKRLARPVKH-QKPLEPSVQLHSYYYSTHDLKIGSEELVYVTHA 1000

  Fly   519 ----PLHC--GKNINVVVMDNTFIQCGFIYCTSIDLAYEVTKMQRDIQEYGEKIAKCATYAPPIN 577
                ..:|  .:|.||:.                .|:|.:.::.:.:..     .|.:|.||  .
Mouse  1001 DDPWTFYCQLARNTNVLE----------------QLSYNIMQLSKALLN-----LKASTLAP--G 1042

  Fly   578 ELCIAKY-EGKWRRGLSVELVGDGYPS-ILFIDYGN--IVPTHVTDI-RPYPPQFIFPIMTTQLD 637
            .||:|:| :|.|.||:.:|    ..|| :.|:|:||  |...|:..| |......:.|:...:..
Mouse  1043 TLCLARYTDGNWYRGIIIE----KEPSKVFFVDFGNTYIAVDHLLPIPRDAHDVLLLPMQALKCS 1103

  Fly   638 LIGVPEKPTDEQIKW-----LDKNY--------PIGSVITCSEITFDEETNSYSTRIEKL 684
            |..:|....:|...|     |||:.        |.|.:|.  |: :|:.....::..|||
Mouse  1104 LSDIPHHIPEEVTAWFQETVLDKSLKALVVAKDPDGRLII--EL-YDDSVQINASINEKL 1160

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vretNP_651092.1 TUDOR 322..438 CDD:425754 27/138 (20%)
Tudor_vreteno-like_rpt1 371..424 CDD:410515 15/68 (22%)
TUDOR 524..640 CDD:425754 30/120 (25%)
Tudor_vreteno-like_rpt2 576..631 CDD:410516 19/59 (32%)
Tdrd6NP_001154838.1 Tudor_TDRD6_rpt1 6..136 CDD:410491
Tudor_TDRD6_rpt2 239..379 CDD:410492
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 287..315
Tudor_SF 494..628 CDD:470623
Tudor_SF 771..891 CDD:470623 28/142 (20%)
Tudor_SF 980..1104 CDD:470623 34/150 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1271..1296
Tudor_SF 1312..1426 CDD:470623
Tudor_SF 1524..1666 CDD:470623
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1699..1733
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1860..1885
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1930..1985
Blue background indicates that the domain is not in the aligned region.

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