DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment vret and LOC1270837

DIOPT Version :10

Sequence 1:NP_651092.1 Gene:vret / 42695 FlyBaseID:FBgn0263143 Length:691 Species:Drosophila melanogaster
Sequence 2:XP_061512893.1 Gene:LOC1270837 / 1270837 VectorBaseID:AGAMI1_008379 Length:1441 Species:Anopheles gambiae


Alignment Length:726 Identity:142/726 - (19%)
Similarity:236/726 - (32%) Gaps:219/726 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 APLPPK---------------DEKEQRATRQAKYPY---LVVPKSSPYVTEKMLINFFGRALIKE 86
            ||.|.:               ||:...|. .|.|||   .|.|.:.||:....|....|:..:::
Mosquito   431 APAPARAPAAAAPAYQRAKSLDERTSTAA-TAAYPYQGARVPPNAMPYIEPPKLPTLPGKKSLQD 494

  Fly    87 MEFRRL---SRVYFVYFENIASLETAQQRVQRYPNLIKCITGRPQKEREITSDPVT---STEPMP 145
                ||   ..|.....|.:|.|:|:       |.::...|  |..|.::.|...|   .|...|
Mosquito   495 ----RLKINQEVADEDLEKVAKLQTS-------PPIVTEPT--PPMESKLPSKTTTLPSGTSFYP 546

  Fly   146 TPGPAISATERTPVNHNREVPISTGGQNHPEFFRPPLVTKDDYKRGSLLATNDPIQ---RYLNVK 207
            |.|.:.:|:..  ||     ..:|||          :.|.||..     ||  |::   ||...|
Mosquito   547 TNGSSYTASGM--VN-----GAATGG----------VFTWDDPN-----AT--PVEILMRYSQHK 587

  Fly   208 YEFALERHDIYKLKDETRIPQVVLHFRSGRTIP--------------LSTVAVTEEDKTKSLLED 258
             .||...:..||||.......|.::..|..|.|              ::.:.....|:::.|   
Mosquito   588 -GFARPEYGYYKLKSGRYQCLVTVNGSSYSTYPEDFVSQFEGQFAAAMNAIEAIRRDESRQL--- 648

  Fly   259 GVSKCVVCQNWTDTFCKLCK-----MPFCNASCFAD-----VAEQHKQACGKGEILNLDEKVGRK 313
             .|||:      |:...:..     :..|....|:.     ..|.|:..........:|:...:.
Mosquito   649 -YSKCL------DSDRDIAHHIHGLLASCPHGMFSKNIPNAFQETHRALLPDHWFAIIDQYANQL 706

  Fly   314 YPKPGLP-----------PSGSKVRITAFEQTNVVYVRSADIQIDIAYY---------------- 351
            :.....|           ||||.|.....|...:. |....:..|..|:                
Mosquito   707 FVLEDGPNGDWIVYAREQPSGSDVESNTSEACQMA-VNQLTLPWDDQYWNLYVTNPVSTVEVWAR 770

  Fly   352 -----------TVLTEV---MMLGKDASKLQSTPVCGQIVLYKFEGHMSRAMVLNVD-NIKEIYV 401
                       :::|::   ||..:.::|.......|:..|........|..|:.:: ...:...
Mosquito   771 LVGKEYSDKMDSLITDIEMSMMTNQASAKKDVAAAVGEYYLVSISDCWFRVRVVEINYETNQCQC 835

  Fly   402 VFIDFGSVEVTQLERLYECSSYLAGLTCYPVAVKLRGVPRRFVGPNIREVM-YELDQSLVFNIKY 465
            .|||.|..|...|::||.|......|....:...|.|:......|..:.:: ..::..::..:..
Mosquito   836 FFIDIGDSEQLALDQLYRCEPQYLDLPAQAICFTLEGLEDFSENPTAKHILGQRINHRVLIGMIL 900

  Fly   466 SSRE--------------------YDTSKGMQVVVMTEIDINRSLNRLFKTILTPVEPSVSDLGY 510
            |.||                    ||||.....||...:     |.::.|::..| |.:...:.|
Mosquito   901 SKREEYEQAEQRDGIGSSSLKVVLYDTSSAEDEVVNPIL-----LQQICKSMPVP-ELNRKSVNY 959

  Fly   511 KEDCLPYIPLHCGKNINVVVMDNTFIQCGFIYCTSIDLAYEVTKM-----QRDIQE------YGE 564
                           :::..:|:.    |.:||........:.|:     |.|..|      |..
Mosquito   960 ---------------VSITYVDDQ----GDVYCQKDGAMNYIQKLITNLTQSDALEDQHRGLYNT 1005

  Fly   565 KIAKCATYAPPINELCIAKYE--GKWRRGLSVELVGDGYPSILFIDYG-----NIVPTHVTD--- 619
            |       |....:|.:.:.|  |||.|.:........|..:.::|.|     |:...:..|   
Mosquito  1006 K-------ASDQQQLYLVQDETDGKWYRAVREAEESGPYCRMHYVDIGCRRRANVQNIYRLDSLS 1063

  Fly   620 --IRPYPPQFI 628
              :|.||||.|
Mosquito  1064 LGLRSYPPQAI 1074

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vretNP_651092.1 TUDOR 322..438 CDD:425754 27/146 (18%)
Tudor_vreteno-like_rpt1 371..424 CDD:410515 13/53 (25%)
TUDOR 524..640 CDD:425754 28/128 (22%)
Tudor_vreteno-like_rpt2 576..631 CDD:410516 17/65 (26%)
LOC1270837XP_061512893.1 None

Return to query results.
Submit another query.