DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6985 and RAD54

DIOPT Version :10

Sequence 1:NP_651091.1 Gene:CG6985 / 42694 FlyBaseID:FBgn0039017 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_011352.1 Gene:RAD54 / 852713 SGDID:S000003131 Length:898 Species:Saccharomyces cerevisiae


Alignment Length:239 Identity:52/239 - (21%)
Similarity:92/239 - (38%) Gaps:48/239 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   268 IFQIVCDHPVLLKTLGTNPVFKEIMEVLDAILPP----WPSMGLYD-----SAKFEFLHVMLDHL 323
            |.:.:|:||.||.       |::..:..|.:..|    .|.....|     ||||..|...|..:
Yeast   610 ILKKLCNHPNLLN-------FEDEFDDEDDLELPDDYNMPGSKARDVQTKYSAKFSILERFLHKI 667

  Fly   324 VAERGEKCCILANSEDCLTLVRGYCQSYSLDHAQLDGPQKVNLFNSLAD------GEPMIGLILT 382
            ..|..:|..:::|....|.|:...|:.......:|||...:|....|.|      |:..|.|:  
Yeast   668 KTESDDKIVLISNYTQTLDLIEKMCRYKHYSAVRLDGTMSINKRQKLVDRFNDPEGQEFIFLL-- 730

  Fly   383 SDLSALRALRCKHLIIYNHNSRQQANQLLAVG-----AMDTKIYTLITAGGSPEELQFYGHMGDD 442
                :.:|..|...:|       .||:|:.:.     |.|.:....:...|..::...|..:...
Yeast   731 ----SSKAGGCGINLI-------GANRLILMDPDWNPAADQQALARVWRDGQKKDCFIYRFISTG 784

  Fly   443 SIEDLQNCRSQLIPTASNNLADWTKSEPPFDRVFFEETAISDSL 486
            :||:....|..:..:.|:.:.|   ::...:|:|     .||:|
Yeast   785 TIEEKIFQRQSMKMSLSSCVVD---AKEDVERLF-----SSDNL 820

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6985NP_651091.1 DUF2439 60..128 CDD:463065
RAD54NP_011352.1 Rad54_N 29..246 CDD:430137
HepA <271..806 CDD:440319 46/215 (21%)
DEXHc_RAD54A 271..554 CDD:350825
Blue background indicates that the domain is not in the aligned region.

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