DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6985 and CHR42

DIOPT Version :10

Sequence 1:NP_651091.1 Gene:CG6985 / 42694 FlyBaseID:FBgn0039017 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_197542.1 Gene:CHR42 / 832164 AraportID:AT5G20420 Length:1261 Species:Arabidopsis thaliana


Alignment Length:467 Identity:90/467 - (19%)
Similarity:144/467 - (30%) Gaps:189/467 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 RRAAKRESEAAPPKEEPQSPCSWPKNNLPSEWGTSGGTQSLGPREFRAGENPLKDSRIFHVLWRN 66
            :|.::.....||..|:...|..:.|..|      |.|..           |.|.|          
plant   460 KRTSRSSRSVAPKTEDSDEPRVYKKVTL------SAGAY-----------NKLID---------- 497

  Fly    67 QTTKKHKTWTGNGTLVVTGSIVTLKDDTGKVVD-------TMTYFK-----QRQLQENDQLEVGS 119
                   |:..|     ..|.:..||:...|||       |...||     ::.|.|:.:.|...
plant   498 -------TYMNN-----IESTIAAKDEPTSVVDQWEELKKTNFAFKLHGDMEKNLSEDGEGETSE 550

  Fly   120 KDVEIQEEIKTVEECLIQRQL----EIANWCQKID------AQNGCTDTSPPPAD---SAPVRSH 171
            .::..:|    :|.||....:    |:     ::|      |::||........:   ...:..|
plant   551 NEMLWRE----MELCLASSYILDDNEV-----RVDNEAFEKARSGCEHDYRLEEEIGMCCRLCGH 606

  Fly   172 LLKKIKREADAFAPPHLEISQHR----EDKHVSYAAADSSTSMGKKIYEQNTLKIENPTKEFT-- 230
            :..:||   |..||    .::|:    |.||:.  ..|..|.:..|         |..||:|:  
plant   607 VGSEIK---DVSAP----FAEHKKWTIETKHIE--EDDIKTKLSHK---------EAQTKDFSMI 653

  Fly   231 ----------QSEYLCLLTPAELQKK--------------------------------------- 246
                      :|:.:..|.| :|::|                                       
plant   654 SDSSEMLAAEESDNVWALIP-KLKRKLHVHQRRAFEFLWRNVAGSVEPSLMDPTSGNIGGCVISH 717

  Fly   247 ---------ILLFVSEYAQ----------TSKTESST-LKEIFQIVCDHPVLL------------ 279
                     |:.|::.|.:          ..||...| .||..:.....||.|            
plant   718 SPGAGKTFLIIAFLTSYLKLFPGKRPLVLAPKTTLYTWYKEFIKWEIPVPVHLIHGRRTYCTFKQ 782

  Fly   280 -KTLGTNPVFK---EIMEVLDAI--LPPW---PSMGLYDSAKFEFLHVMLDHLVAERGEKCCILA 335
             ||:..|.|.|   ::|.|||.:  :..|   ||:.:.....|..| :..|...|.|.....:|.
plant   783 NKTVQFNGVPKPSRDVMHVLDCLEKIQKWHAHPSVLVMGYTSFTTL-MREDSKFAHRKYMAKVLR 846

  Fly   336 NSEDCLTLVRGY 347
            .|...|.|..|:
plant   847 ESPGLLVLDEGH 858

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6985NP_651091.1 DUF2439 60..128 CDD:463065 15/79 (19%)
CHR42NP_197542.1 DEXHc_ATRX-like 679..945 CDD:350765 33/181 (18%)
SF2_C_SNF 1056..1192 CDD:350180
Blue background indicates that the domain is not in the aligned region.

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