DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6985 and CHR38

DIOPT Version :10

Sequence 1:NP_651091.1 Gene:CG6985 / 42694 FlyBaseID:FBgn0039017 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_001327911.1 Gene:CHR38 / 823287 AraportID:AT3G42670 Length:1258 Species:Arabidopsis thaliana


Alignment Length:284 Identity:59/284 - (20%)
Similarity:103/284 - (36%) Gaps:53/284 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 EFRAGENPLKDSRIFHVLWRNQTTKKHKTWTGNGTLVVTG--SIVTLKDDTGKVVDTMTYFKQRQ 108
            :|.....|.:|  :.|||   ....|.:.|....:::|.|  |.:||..:..|.....  :..:.
plant   783 QFEGIPKPSQD--VMHVL---DCLDKIQKWHAQPSVLVMGYTSFLTLMREDSKFAHRK--YMAKV 840

  Fly   109 LQENDQLEV-------GSKDVEIQEEIKTVE---ECLIQRQLEIANWCQKIDAQNGCTDTSPPPA 163
            |:|:..|.|       .|....:::.:..|:   ..|:...|...|:|:..:     |.....|.
plant   841 LRESPGLLVLDEGHNPRSTKSRLRKALMKVDTDLRILLSGTLFQNNFCEYFN-----TLCLARPK 900

  Fly   164 DSAPVRSHLLKKIKREADAFAPPHLEISQHREDK-HVSYAAADSSTSMG-KKIYEQNTLKIENPT 226
            ....|...|.||.:........|||  .::|..| .:...|....|.:| :::...|.|:  |.|
plant   901 FVHEVLVELDKKFQTNQAEQKAPHL--LENRARKFFLDIIAKKIDTKVGDERLQGLNMLR--NMT 961

  Fly   227 KEFTQSE----------------YLCLLTPAELQKKILLFVSEYAQTSKTESSTLKEIFQIVCDH 275
            ..|..:.                |..|:...::|.|.|..:.....|.......|:.:..:...|
plant   962 SGFIDNYEGSGSGSGDVLPGLQIYTLLMNSTDVQHKSLTKLQNIMSTYHGYPLELELLITLAAIH 1026

  Fly   276 PVLLKTLGT-----NPVFKEIMEV 294
            |.|:||...     ||  :|::|:
plant  1027 PWLVKTTTCCAKFFNP--QELLEI 1048

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6985NP_651091.1 DUF2439 60..128 CDD:463065 16/76 (21%)
CHR38NP_001327911.1 DEXHc_ATRX-like 676..941 CDD:350765 36/171 (21%)
SF2_C_SNF 1052..1188 CDD:350180
Blue background indicates that the domain is not in the aligned region.

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