DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6985 and rad-54.L

DIOPT Version :9

Sequence 1:NP_651091.1 Gene:CG6985 / 42694 FlyBaseID:FBgn0039017 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_492438.1 Gene:rad-54.L / 172728 WormBaseID:WBGene00004298 Length:818 Species:Caenorhabditis elegans


Alignment Length:410 Identity:82/410 - (20%)
Similarity:140/410 - (34%) Gaps:126/410 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   167 PVRSHLLKKIKREADAFAPPHL-----EISQHREDKHVSYAAADSSTSMGKKIYEQNTLKIENPT 226
            |:::.||:..  ....|..|.|     |..:..|:..:....||:|:        ::..|.|..|
 Worm   376 PIQNDLLEYF--SLVNFVNPGLLGTASEFRKKFENAILKGRDADASS--------EDQKKGEEKT 430

  Fly   227 KEFTQSEYLCLL--TPAELQKKILLFVSEYAQTSKTESSTLKEIF-----------QIV------ 272
            ||.......|::  |.|.|.|.:.:   :|......::|||:|..           :||      
 Worm   431 KEMISLVEKCIIRRTSALLTKYLPV---KYEHIICCKNSTLQETLYNKLIECEKQNRIVEKDKGA 492

  Fly   273 --------------CDHPVLL-------------KTLGT----------NPVFKEIMEVLDAILP 300
                          |:||.|:             |.|..          :|.|...|:|||.|| 
 Worm   493 TASALSFITHLKKLCNHPYLVYDEFQKPDNRFRNKCLSIFPESFNPKSFDPSFSGKMKVLDYIL- 556

  Fly   301 PWPSMGLYDSAKFEFLHVMLDHLVAER--GEKCCILANSEDCLTLVRGYCQSYSLDHAQLDGPQK 363
                                  .|..:  .:|..:::|....:......|:....|..:|||...
 Worm   557 ----------------------AVTRKTTDDKFVLVSNYTQTIDQFMELCKLRGYDFVRLDGSMS 599

  Fly   364 VNLFNSLAD--GEP---MIGLILTSDLS--ALRALRCKHLIIYNHN-SRQQANQLLAVGAMDTK- 419
            :...:.:.|  .:|   :...:|:|...  .|..:....|::::.: :....:|.:|....|.: 
 Worm   600 IKQRSKIVDTFNDPASTIFCFLLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQK 664

  Fly   420 ----IYTLITAGGSPEELQFYGHMGDDSIEDLQNCRSQLIPTASNNLADWTKSEPPFDRVFFEET 480
                ||.|: |.||.||..|.......::       |..:..|..::|....||...:....|.|
 Worm   665 KMCFIYRLL-ATGSIEEKMFQRQTHKKAL-------SSCVVDAGEDVARHFSSEQLRELFKLEST 721

  Fly   481 AISDSLD------CIQLVYS 494
            ..||:.:      |||.|.|
 Worm   722 VASDTHEKLKCKRCIQGVES 741

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6985NP_651091.1 DUF2439 60..128 CDD:287368
rad-54.LNP_492438.1 SNF2_N 205..513 CDD:278600 31/149 (21%)
DEXDc 226..376 CDD:238005 82/410 (20%)
Helicase_C 546..662 CDD:278689 22/138 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0390
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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