| Sequence 1: | NP_524453.1 | Gene: | Dcr-1 / 42693 | FlyBaseID: | FBgn0039016 | Length: | 2249 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_417062.1 | Gene: | rnc / 947033 | ECOCYCID: | EG10857 | Length: | 226 | Species: | Escherichia coli |
| Alignment Length: | 260 | Identity: | 65/260 - (25%) |
|---|---|---|---|
| Similarity: | 104/260 - (40%) | Gaps: | 61/260 - (23%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 1997 EESLGYKFRDRSYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTD 2061
Fly 2062 LRSALVNNTIFASLAVRHGFHKFFRHLSPGLNDVIDRFVRIQQENGHCISEEYYLLSEEECDDAE 2126
Fly 2127 DVEVPKALGDVFESIAGAIFLDSNMSLDVVWHVYSNMMSPEIEQFS----NSVPKSPIRELLELE 2187
Fly 2188 PETAKFGKPEKLADGRRVRV---------TVDVFCKGTFR---GIGRNYRIAKCTAAKCALRQLK 2240
Fly 2241 2240 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Dcr-1 | NP_524453.1 | DEAD-like_helicase_N | 15..208 | CDD:475120 | |
| Dicer_PBD | 240..344 | CDD:277191 | |||
| P-loop containing Nucleoside Triphosphate Hydrolases | 490..614 | CDD:476819 | |||
| Dicer_dimer | 825..916 | CDD:460900 | |||
| PAZ_dicer_like | 1091..1212 | CDD:239209 | |||
| RIBOc | 1724..1930 | CDD:238333 | |||
| RIBOc | 2008..2172 | CDD:238333 | 41/163 (25%) | ||
| DSRM_DICER | 2177..2240 | CDD:380680 | 17/74 (23%) | ||
| rnc | NP_417062.1 | Rnc | 6..210 | CDD:440336 | 58/244 (24%) |
| Blue background indicates that the domain is not in the aligned region. | |||||