Sequence 1: | NP_524453.1 | Gene: | Dcr-1 / 42693 | FlyBaseID: | FBgn0039016 | Length: | 2249 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_013737.1 | Gene: | MRPL3 / 855039 | SGDID: | S000004626 | Length: | 390 | Species: | Saccharomyces cerevisiae |
Alignment Length: | 352 | Identity: | 69/352 - (19%) |
---|---|---|---|
Similarity: | 118/352 - (33%) | Gaps: | 117/352 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 669 RGTVKILNPEVFSKQPPTACDIKLQEIQDEL-----------PAAAQLDTSNSSDEAVSMSNTSP 722
Fly 723 SE---------------------SSTEQKSRRFQCELSSLTEPEDTSDTTAEIDTAHSLASTTKD 766
Fly 767 LVHQMAQYREIE---QMLLSKCANTEPPEQEQSEAERFSACLAAYRPKPHLLTGASVDLGSAIAL 828
Fly 829 VNKYCARLPSDTFTKLTALWRCTRNERAGVTLFQY------TLRLPINSPLKHDIVGLPMPTQTL 887
Fly 888 AR--RLAALQACV-----ELHRI------------GELDDQLQPIGKEGF---------RALEP- 923
Fly 924 --DWECFELEPEDEQIVQLSDEPRPGT 948 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Dcr-1 | NP_524453.1 | DEAD-like_helicase_N | 15..208 | CDD:421690 | |
Dicer_PBD | 240..344 | CDD:277191 | |||
DEAD-like_helicase_C | 490..614 | CDD:365791 | |||
Dicer_dimer | 825..916 | CDD:397444 | 19/115 (17%) | ||
PAZ_dicer_like | 1091..1212 | CDD:239209 | |||
RIBOc | 1724..1930 | CDD:238333 | |||
RIBOc | 2008..2172 | CDD:238333 | |||
DSRM_DICER | 2177..2240 | CDD:380680 | |||
MRPL3 | NP_013737.1 | Rnc | 114..376 | CDD:223644 | 56/300 (19%) |
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG0571 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |