Sequence 1: | NP_524453.1 | Gene: | Dcr-1 / 42693 | FlyBaseID: | FBgn0039016 | Length: | 2249 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001184881.1 | Gene: | DCL1 / 839574 | AraportID: | AT1G01040 | Length: | 1910 | Species: | Arabidopsis thaliana |
Alignment Length: | 2410 | Identity: | 468/2410 - (19%) |
---|---|---|---|
Similarity: | 759/2410 - (31%) | Gaps: | 1032/2410 - (42%) |
- Green bases have known domain annotations that are detailed below.
Fly 18 RDFQVELLATAYERNTIICLGHRSSKEFIALKLLQELSRRARRHGR--VSVYLSCEVGTSTEPCS 80
Fly 81 IYTMLT-------------HLTDLRVWQEQPDMQIPFDHCWTDYHVSILRPEGFLYLLETRELLL 132
Fly 133 SSVELIVLEDCHDSAVYQRIRPLFENHIMPAPPAD-RPRILGL-AGPLHSAGCELQQLSAM---- 191
Fly 192 LATLEQSVLCQIETASDIVTVLRYCSRPHEYIVQ----CAPFEMDE-LSLVLADVLNTHKSFLLD 251
Fly 252 HRYDPYEIYGTDQFM--------DELKDI--------PDPKVDPLNVINSLLVVLHEMGPWCTQR 300
Fly 301 AAHHF---YQCNEKL--KVKTPHERHYLLYCLVSTALIQLYSLCEHAFHRHLGSGSDSRQTIERY 360
Fly 361 SSPKVRRLLQTLRCFKPEEVHTQADGLRRMRHQVDQADFNRLSHTLESKCRMVDQMDQPPTETRA 425
Fly 426 LVATLEQILHTTEDRQTNRSAA--RVTPTPTPAHAKPKPSSGANTAQPRTRRRVYTRRHHRDHND 488
Fly 489 GSDTLCALIYCNQNHTARVLFELLAEISRRDPDLKFLRCQYTTDRVADPTTEPKEAELEHRRQEE 553
Fly 554 VLKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPAYHVILVAPSY 618
Fly 619 KSPTVGSVQLTDRSHRYICATGDTTEADSDSDDSAMPNSSGSDPYTFGTARGTVKILNPEVFSKQ 683
Fly 684 PPTACDIKLQEIQDELPAAAQLDTSNSSDEAVSMSNTSPSESSTEQKSRRFQCELSSLTEPEDTS 748
Fly 749 DTTAEIDTAHSLASTTKDLVHQMAQYREIEQMLLSKCANTEPPEQEQSEAERFSACLAAYRPKPH 813
Fly 814 LLTGASVDLGSAIALVNKYCARLPSDTFTKLTALWRCTRNER-AGVTLFQYTLRLPINSPLKHDI 877
Fly 878 VGLPM-PTQTLARRLAALQACVELHRIGELDDQLQPIGKEGFRALEPDWECFELEPEDEQIVQLS 941
Fly 942 DEPRPGTTKRRQYYYKRIA-----------SEFCDCRPVAGAPCYLYFIQLTLQCPIPEEQNTRG 995
Fly 996 RKIYPPEDAQQGFGILTTKRIPKLSAFSIF---TRSGEV--KVSLELAKERVILTSEQIVCINGF 1055
Fly 1056 LNYTFTNVLRLQKF---LMLF------DPDST----ENCVFIVP----TVKAPAGGKHIDWQFLE 1103
Fly 1104 LI---QANGNTMPRAVPD-----------EERQAQPFDPQRFQDAVVMPWYRNQDQPQY------ 1148
Fly 1149 --------------------------------------------------------FYVAEICPH 1157
Fly 1158 LSPLSCFPGD-------NYRTFKHYYLVKYGLTIQNTSQPLLDVDHTSARLNFLTPRYVNRKGVA 1215
Fly 1216 LPTSSEETKRAKRENLEQKQILVPELCTVHPFPASLWRTAVCLPCILYRINGLLLADDIRKQVSA 1280
Fly 1281 DLGLGRQQIEDEDFEWPMLDFGWSLSEVLKKSRESKQKESLKDDTINGKDLADVEKKPTSEETQL 1345
Fly 1346 DKDSKDDKVEKSAIELIIEGEEKLQEADDFIEIGTWSNDMADDIASFNQEDDDEDDAFHLPVLPA 1410
Fly 1411 NVKFCDQQTRYGSPTFWDVSNGESGFKGPKSSQNKQGGKGKAKGPAKPTFNYYDSDNSLGSSYDD 1475
Fly 1476 DDNAGPLNYMHHNYSSDDDDVADDIDAGRIAFTSKNEAETIETAQEVEKRQKQLSIIQATNANER 1540
Fly 1541 QYQQTKNLLIGFNFKHEDQKEPATIRYEESIAKLKTEIESGGMLVPHDQQLVLKRSDAAEAQVAK 1605
Fly 1606 VSMMELLKQLLPYVNEDVLAKKLGDRRELLLSDLVELNADWVARHEQETYNVMGCGDSFDNYNDH 1670
Fly 1671 HRLNLDEKQLKLQYERIEIEPPTSTKAITSAILPAGFSFDRQPDLVGHPGPSPSIILQALTMSNA 1735
Fly 1736 NDGINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVANLNLYRLGRRKRLGEYMIA 1800
Fly 1801 TKFEPHDNWLPPCYYVPKELEKALIEAKIPTHHWKLADLLDIKNLSSVQICEMVREKADALGLEQ 1865
Fly 1866 NGGAQNGQLDDSNDSCNDFSCFIPYNLVSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWL 1930
Fly 1931 GVRVLPITRQLDGGNQEQRIPGSTKPNAENVVTVYGAWPTPRSPLLHFAPNATEELDQLLSGFEE 1995
Fly 1996 FEESLGYKFRDRSYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALT 2060
Fly 2061 DLRSALVNNTIFASLAVRHGFHKFFRHLSPGLNDVIDRFVR-IQQENGHCISEEYYLLSEEECDD 2124
Fly 2125 AEDVEVPKALGDVFESIAGAIFLDSNMSLDVVWHVYSNMMSPEIEQFSNSVPKSPIRELLE---- 2185
Fly 2186 ----LEPETAKFGKPEKLADGRRVRVTVDVFCKGTFRGIGRN--YRIAKCTAAKCALRQLKKQGL 2244
Fly 2245 IAKKD 2249 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Dcr-1 | NP_524453.1 | DEAD-like_helicase_N | 15..208 | CDD:421690 | 48/210 (23%) |
Dicer_PBD | 240..344 | CDD:277191 | 23/124 (19%) | ||
DEAD-like_helicase_C | 490..614 | CDD:365791 | 35/123 (28%) | ||
Dicer_dimer | 825..916 | CDD:397444 | 30/92 (33%) | ||
PAZ_dicer_like | 1091..1212 | CDD:239209 | 41/203 (20%) | ||
RIBOc | 1724..1930 | CDD:238333 | 57/205 (28%) | ||
RIBOc | 2008..2172 | CDD:238333 | 73/164 (45%) | ||
DSRM_DICER | 2177..2240 | CDD:380680 | 20/72 (28%) | ||
DCL1 | NP_001184881.1 | DEXDc | 250..456 | CDD:214692 | 48/219 (22%) |
DEXDc | 263..415 | CDD:238005 | 35/162 (22%) | ||
Helicase_C | 648..764 | CDD:278689 | 36/141 (26%) | ||
Dicer_dimer | 841..927 | CDD:281376 | 28/87 (32%) | ||
PAZ_CAF_like | 1177..1321 | CDD:239210 | 34/154 (22%) | ||
RIBOc | 1358..1537 | CDD:238333 | 60/212 (28%) | ||
Rnc | 1558..1785 | CDD:223644 | 96/253 (38%) | ||
RIBOc | 1576..1731 | CDD:238333 | 73/166 (44%) | ||
DSRM | 1735..1785 | CDD:214634 | 16/59 (27%) | ||
DSRM | 1832..1905 | CDD:294045 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 1 | 1.000 | 102 | 1.000 | Domainoid score | I2292 |
eggNOG | 1 | 0.900 | - | - | E1_COG0571 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 473 | 1.000 | Inparanoid score | I346 |
OMA | 1 | 1.010 | - | - | QHG57860 | |
OrthoDB | 1 | 1.010 | - | - | D1337630at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0002051 | |
OrthoInspector | 1 | 1.000 | - | - | mtm1149 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_101152 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X1728 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
12 | 11.740 |