Sequence 1: | NP_524453.1 | Gene: | Dcr-1 / 42693 | FlyBaseID: | FBgn0039016 | Length: | 2249 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_077024.2 | Gene: | DHX58 / 79132 | HGNCID: | 29517 | Length: | 678 | Species: | Homo sapiens |
Alignment Length: | 660 | Identity: | 142/660 - (21%) |
---|---|---|---|
Similarity: | 232/660 - (35%) | Gaps: | 222/660 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 18 RDFQVELLATAYE-RNTIICL----GHRSSKEFIALKLLQELSRRARRHGRVSVYLSCEVGTSTE 77
Fly 78 PCSIYTMLTHLTDLRVWQEQPDMQIPFDHCWTDYHVSILRPE-----GFLYLLETRELLLSSVE- 136
Fly 137 --------------------LIVLEDCHDS---AVYQRIRPLF-ENHIMPAPPADRPRILGLAGP 177
Fly 178 LHSAGCELQQLSAMLATLEQSVLCQIETASDIVTVLRYCSRPHEYIV----QCAPFEMDELSLVL 238
Fly 239 ADVLNTHKSFLLDHRYDPYEIYGTDQFMDELKDIPDPKVDPLNVINSLLVVLHEMGPWCTQRAAH 303
Fly 304 HFYQCNEKLKVKTPHERHYLLYCLVSTALIQLYSLCEHAFHRHLGSGSDSRQTIERYSSPKVRRL 368
Fly 369 LQTLRCFKPEEVHTQADGLRRMRHQVDQADFNRLSHTLESKCRMVDQMDQPPTETRALVATLEQI 433
Fly 434 LHTTEDRQTNRSAARVTPTPTPAHAKPK----------PSSGANTAQPRTRRRVYTRRHHRDHND 488
Fly 489 GSDTLCALIYCNQNHTARVLFELLAEISRRDPDLKFLRCQYTTDRVADPTTEPKEAELEHRRQEE 553
Fly 554 VLKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPAYHVILVAPSY 618
Fly 619 KSPTVGSVQL 628 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Dcr-1 | NP_524453.1 | DEAD-like_helicase_N | 15..208 | CDD:421690 | 48/224 (21%) |
Dicer_PBD | 240..344 | CDD:277191 | 21/103 (20%) | ||
DEAD-like_helicase_C | 490..614 | CDD:365791 | 32/123 (26%) | ||
Dicer_dimer | 825..916 | CDD:397444 | |||
PAZ_dicer_like | 1091..1212 | CDD:239209 | |||
RIBOc | 1724..1930 | CDD:238333 | |||
RIBOc | 2008..2172 | CDD:238333 | |||
DSRM_DICER | 2177..2240 | CDD:380680 | |||
DHX58 | NP_077024.2 | MPH1 | 2..542 | CDD:224036 | 142/660 (22%) |
DEXDc | 18..170 | CDD:238005 | 41/180 (23%) | ||
DECH box | 131..134 | 0/2 (0%) | |||
MDA5_ID | 227..345 | CDD:277189 | 37/188 (20%) | ||
Helicase_C | 350..472 | CDD:278689 | 35/151 (23%) | ||
LGP2_C | 552..664 | CDD:276944 | |||
RNA-binding | 572..655 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1337630at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R301 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.950 |