DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dcr-1 and MRPL44

DIOPT Version :10

Sequence 1:NP_524453.1 Gene:Dcr-1 / 42693 FlyBaseID:FBgn0039016 Length:2249 Species:Drosophila melanogaster
Sequence 2:NP_075066.1 Gene:MRPL44 / 65080 HGNCID:16650 Length:332 Species:Homo sapiens


Alignment Length:392 Identity:79/392 - (20%)
Similarity:118/392 - (30%) Gaps:180/392 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 DFQVELLATAYERNTII--------CLGHRSSKEFIALKLLQELSRRARRHGRVSVYLSCEVGTS 75
            :|.::||.||:..:..|        .||.......:.||..||||               |.|||
Human    82 NFSLDLLKTAFVNSCYIKSEEAKRQQLGIEKEAVLLNLKSNQELS---------------EQGTS 131

  Fly    76 TEPCSIYTMLTHLTDLRVWQEQPDMQIPFDHCWTDYHVSILRPEGFLYLLETRELLLSSVELIVL 140
            ..    .|.||...:    .|.|||.                .||...|::    .|:..|::  
Human   132 FS----QTCLTQFLE----DEYPDMP----------------TEGIKNLVD----FLTGEEVV-- 166

  Fly   141 EDCH---DSAVYQRIRPLFENHIMPAPPADRPRILGLAGPLHSAGCELQQ-LSAMLATLEQSVLC 201
              ||   :.||.|    |..:...|.|||                 .||| ..|::..|.||   
Human   167 --CHVARNLAVEQ----LTLSEEFPVPPA-----------------VLQQTFFAVIGALLQS--- 205

  Fly   202 QIETASDIVTVLRYCSRPHEYIVQCAPFEMDELSLVLADVLNTHKSFLLDHRYDPYEIYGTDQFM 266
                           |.|            :..:|.:.|.|.|             ::.|.:.| 
Human   206 ---------------SGP------------ERTALFIRDFLIT-------------QMTGKELF- 229

  Fly   267 DELKDIPDPKVDPLNVINSLLVVLHEMGPWCTQRAAHHFYQCNEKLKVKTPHER----------- 320
                       :...:||.:.:::.|:                :|..|..|..|           
Human   230 -----------EMWKIINPMGLLVEEL----------------KKRNVSAPESRLTRQSGGTTAL 267

  Fly   321 --HYL-LYC---LVS-----TALIQLYSLCEHAFHRHLGSGSDSRQTIERYSSPKVRRLLQTLRC 374
              ::: |||   |::     |.|:........|..:..|...:.|..  .||.||     :|||.
Human   268 PLYFVGLYCDKKLIAEGPGETVLVAEEEAARVALRKLYGFTENRRPW--NYSKPK-----ETLRA 325

  Fly   375 FK 376
            .|
Human   326 EK 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dcr-1NP_524453.1 DEAD-like_helicase_N 15..208 CDD:475120 47/200 (24%)
Dicer_PBD 240..344 CDD:277191 19/125 (15%)
P-loop containing Nucleoside Triphosphate Hydrolases 490..614 CDD:476819
Dicer_dimer 825..916 CDD:460900
PAZ_dicer_like 1091..1212 CDD:239209
RIBOc 1724..1930 CDD:238333
RIBOc 2008..2172 CDD:238333
DSRM_DICER 2177..2240 CDD:380680
MRPL44NP_075066.1 Rnc <138..304 CDD:440336 49/285 (17%)
DSRM_MRPL44 225..307 CDD:380703 16/109 (15%)
Blue background indicates that the domain is not in the aligned region.

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