Sequence 1: | NP_524453.1 | Gene: | Dcr-1 / 42693 | FlyBaseID: | FBgn0039016 | Length: | 2249 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_011535336.1 | Gene: | FANCM / 57697 | HGNCID: | 23168 | Length: | 2053 | Species: | Homo sapiens |
Alignment Length: | 2009 | Identity: | 369/2009 - (18%) |
---|---|---|---|
Similarity: | 656/2009 - (32%) | Gaps: | 638/2009 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 18 RDFQVELLATAYERNTIICLGHRSSKEFIALKLLQELSRRARRHGRVSVYLSCEVGTSTEPCSIY 82
Fly 83 TMLTHLTDLRVWQEQPDMQIPFDH---------------CWTDYHVSILRPEGFLYLLETRELLL 132
Fly 133 SSVELIVLEDCHDS----AVYQRIRPL--FENHIMPAPPADRPRILGLAGPLHSAGCELQQLSAM 191
Fly 192 LATLEQSVLCQIETAS-DIVTVLRYCSRPHEYIVQ--CAPFEMDELSLVLADVLNTHKSF----- 248
Fly 249 ---LLDHRYDP----YE-IYGTDQFMDELKDIPDPKVDPLNVINSLLVVLHEMGPWCTQRAAHHF 305
Fly 306 YQCNEKLKVKTPHERHYLLYCLVSTALIQLYSLCEHAFHRHLGSGSDSRQTIERYSSPKVRRLLQ 370
Fly 371 TLRCFKPEEVHTQADGLRRMRHQVDQADFNR---LSHTLESKCRMVDQMDQPPTETRALVATLEQ 432
Fly 433 IL--HTTEDRQTNRSAARVTPTPTPAHAKPKPSSGANTAQPRTRRRVYTRRHHRDHNDGSDTLCA 495
Fly 496 LIYCNQNHTARVLFELLAEISRRDPDLKFLRCQYTTDRVADPTTEPKEAELEHRRQEEVLKRFRM 560
Fly 561 HDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPAYHVILVAPS-------- 617
Fly 618 ---------YK--------------SPTVGSVQLTDRSHRYICATGDTTEADSDSDDSAMPNSSG 659
Fly 660 SDPYTFGTARGTVK---ILNPEVFSK-------------QPPTACDIKLQEIQDELPAAAQLDTS 708
Fly 709 NSSDEAVS-----MSNTSPSES--------------------STEQKSRRFQCELSSLTEPED-T 747
Fly 748 SDTTAEIDTAHSLASTTKDLVHQMAQY-REIEQMLLS-------KCANTE-----PPEQEQSEAE 799
Fly 800 RFSACLAAYRPKPHLLTGA--SVDLGSAIALVNKYCARLPSDTFTKLT--ALWRCTRNER----- 855
Fly 856 -AGVTLFQYTLRLPINSPLKHDIV---------------GLPMPTQTLARRLAALQACVELHRIG 904
Fly 905 ELDDQLQPIGKEGFRALEPDWECFELEPEDEQIVQ--LSDEPRP-------------GTTKRRQY 954
Fly 955 YY---KRIASEFCDCRPVAGAPCYLYFIQLTLQCPIPEEQNTRGRKI----YP---------PED 1003
Fly 1004 AQQGFGILTTKRIPKLSAFSIFTRSGEVKVSLELAKERV-------------ILTSEQIVCINGF 1055
Fly 1056 LNYTFTNVLRLQKFLMLFDPDSTE-NCVFIVP----TVKAPAGGK------HIDWQFL---ELIQ 1106
Fly 1107 ANGNTMPRAVPDEERQAQPFDPQRFQDAVVMPWYRNQD-----QPQYFYVA------------EI 1154
Fly 1155 CPHLS----PLSCFPGDNYRTFKHYYLVKYGLTIQNTSQPLLDVDHTSARLNFLT---------- 1205
Fly 1206 ---PRYVNRKGVALPTSSEETKRAKRENL---EQKQILVPELCTVHPFPASLWRTAVCLPCILYR 1264
Fly 1265 INGLLLADDIRKQVSADLGLGRQQIEDEDFEWPMLDFGWSLSEVLKKSRESKQKESLK--DDTIN 1327
Fly 1328 GK-DLAD--VEKKPTS------------EETQL--DKDSKDDKVEKSAIE------LIIEGEEKL 1369
Fly 1370 QEADDFIEIGTWSNDMADDIASFNQEDDDEDDAFHLPVLPANVKFCDQQTRYGSPTFWDVSNGES 1434
Fly 1435 --GFKGPKSSQNKQGGKGKAKGPAKPTFNYYDSDNSLGSSYDDDDNAGPLNYMHHNYSSDDDDVA 1497
Fly 1498 DDIDAGRIAFTSKNEAETIETAQEVEKRQKQLSIIQATNANERQYQQTKNLLIGFNFKHEDQKEP 1562
Fly 1563 ATIRYEESIAKLKTEIESGGMLVPHDQQLVLKRS---DAAEAQVAKVSMMELLKQLLPYVNEDVL 1624
Fly 1625 A--KKLGDRRELLLSDLVELNADWVARHEQETYNVMGCGDSFDNYNDHHRLNLDEKQLKLQYERI 1687
Fly 1688 EIEPPTSTK------AITSAILPAGFSFDRQPDLVGHPGPSPSIILQALTMSNANDGIN 1740 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Dcr-1 | NP_524453.1 | DEAD-like_helicase_N | 15..208 | CDD:421690 | 46/211 (22%) |
Dicer_PBD | 240..344 | CDD:277191 | 18/116 (16%) | ||
DEAD-like_helicase_C | 490..614 | CDD:365791 | 27/123 (22%) | ||
Dicer_dimer | 825..916 | CDD:397444 | 23/113 (20%) | ||
PAZ_dicer_like | 1091..1212 | CDD:239209 | 34/163 (21%) | ||
RIBOc | 1724..1930 | CDD:238333 | 4/17 (24%) | ||
RIBOc | 2008..2172 | CDD:238333 | |||
DSRM_DICER | 2177..2240 | CDD:380680 | |||
FANCM | XP_011535336.1 | MPH1 | 83..617 | CDD:224036 | 126/666 (19%) |
DEXDc | 106..248 | CDD:238005 | 36/169 (21%) | ||
FANCM_ID | 298..413 | CDD:277190 | 21/146 (14%) | ||
HELICc | 439..589 | CDD:238034 | 40/220 (18%) | ||
FANCM-MHF_bd | 675..789 | CDD:293388 | 15/113 (13%) | ||
MRC1 | 1513..>1593 | CDD:286523 | 14/91 (15%) | ||
ERCC4 | 1846..1953 | CDD:280828 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R301 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.030 |