| Sequence 1: | NP_524453.1 | Gene: | Dcr-1 / 42693 | FlyBaseID: | FBgn0039016 | Length: | 2249 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_477436.1 | Gene: | drosha / 35747 | FlyBaseID: | FBgn0026722 | Length: | 1327 | Species: | Drosophila melanogaster |
| Alignment Length: | 1218 | Identity: | 232/1218 - (19%) |
|---|---|---|---|
| Similarity: | 383/1218 - (31%) | Gaps: | 460/1218 - (37%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 1286 RQQIEDEDFEWPMLDFGWSLSEVLKKSRESKQKESLKDDTINGKDLADVEKKPTSEETQLDKDSK 1350
Fly 1351 DDK-----VEKSAIELIIE---------------------GEEKLQEADDFIE------------ 1377
Fly 1378 ---IGTWSNDMADDIASFNQEDDDEDDAFH------LPVLPANVKFCDQQTRYGSPTFWDVSNGE 1433
Fly 1434 SGFKGPK---SSQNKQGGKGKAKGPAKPTFNYYDSDNSLGSSYDDDDNAGPLNYMHHNYSSDDDD 1495
Fly 1496 VADDIDAGRIAFTSKNEAETIETAQEVEKRQKQLSIIQATNANERQYQQTKNLLIGFNFKHEDQK 1560
Fly 1561 EPAT---------IRY----------------------EES------------------------ 1570
Fly 1571 IAKLKTEIESGGMLVPHDQQLVLKRSDAAEAQVAKVSMMELLKQLL---PYVNEDVLAKKLGDRR 1632
Fly 1633 ELLLSDLVEL--------------------------NADW-VARHEQETYNVMGCGDSFDNYNDH 1670
Fly 1671 HRLNLDEKQLKLQYERIEIEPPTSTKAITSAILPAGF---------------------------S 1708
Fly 1709 FDRQPDLVG--------------HP------GPSPSIILQALT----------------MSNAND 1737
Fly 1738 GINL---------------------ERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQVA 1781
Fly 1782 NLNLYRLGRRKRLGEYMIATKFEPHDNWLPPCYYVPKELEKALIEAKIPTHHWKLADLLDIKNLS 1846
Fly 1847 SVQICEMVREKADALGLEQNGGAQNGQLDDSNDSCNDFSCFIPYNLVSQHSIPDKSIADCVEALI 1911
Fly 1912 GAYLIECGPRGALLFMAWLGVRVLPITRQLDGGNQEQRIPGSTKPNAENVVT---------VYGA 1967
Fly 1968 WPT-PRSPLLHFAPNATEE-LD--QLLSGFEEFEESLGYKFRDRSYLLQAMTHASYTPNRLT-DC 2027
Fly 2028 YQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLAVRHGFHKFFRHLSPGL 2092
Fly 2093 NDVIDRFVRIQQENGHCISEEYYLLSEEECDDAEDVEVPKALGDVFESIAGAIFLDSN-MSLDVV 2156
Fly 2157 WHVYSNMMSPEIEQFSNSV----PKSPIRELLELEPETAKFGKPE----KLADG------RRVRV 2207
Fly 2208 TVDVFCKGTFRGIGRNYRIAKCTAAKCALR-------QLKKQ-GLIAK 2247 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Dcr-1 | NP_524453.1 | DEAD-like_helicase_N | 15..208 | CDD:421690 | |
| Dicer_PBD | 240..344 | CDD:277191 | |||
| DEAD-like_helicase_C | 490..614 | CDD:365791 | |||
| Dicer_dimer | 825..916 | CDD:397444 | |||
| PAZ_dicer_like | 1091..1212 | CDD:239209 | |||
| RIBOc | 1724..1930 | CDD:238333 | 36/242 (15%) | ||
| RIBOc | 2008..2172 | CDD:238333 | 42/165 (25%) | ||
| DSRM_DICER | 2177..2240 | CDD:380680 | 19/79 (24%) | ||
| drosha | NP_477436.1 | DLL_N | 64..136 | CDD:289198 | |
| Rnc | 738..>974 | CDD:223644 | 57/357 (16%) | ||
| RIBOc | 826..942 | CDD:197778 | 37/237 (16%) | ||
| rnc | 973..1196 | CDD:234633 | 67/261 (26%) | ||
| RIBOc | 990..1117 | CDD:197778 | 42/164 (26%) | ||
| DSRM | 1125..1196 | CDD:238007 | 18/71 (25%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_COG0571 | |
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 1.810 | |||||