Sequence 1: | NP_524453.1 | Gene: | Dcr-1 / 42693 | FlyBaseID: | FBgn0039016 | Length: | 2249 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001369437.1 | Gene: | DROSHA / 29102 | HGNCID: | 17904 | Length: | 1374 | Species: | Homo sapiens |
Alignment Length: | 1350 | Identity: | 259/1350 - (19%) |
---|---|---|---|
Similarity: | 431/1350 - (31%) | Gaps: | 510/1350 - (37%) |
- Green bases have known domain annotations that are detailed below.
Fly 1109 GNTMPRAVPDEERQAQPFDPQRFQDAVVMPWYRNQDQPQY-----FYVAEICPHLSPLSC---FP 1165
Fly 1166 GDNYRTFKHYYLVKYGLTIQNT---SQPLLDVDHTSARLNFLTPRYVNRKGVALPTSS------- 1220
Fly 1221 --------EETKRAKRENLEQKQILVPELCTVHPFPASLWRTAVCLPCILYRINGLLLADDIRKQ 1277
Fly 1278 VSADLGLGRQQIED--EDFEWPMLDFG------------W-----SLSEVLKKSRESKQKESLKD 1323
Fly 1324 DTINGKD-------LADVEKK---PTSEETQL---DKDSKDD--------KVEKSAI-ELIIEGE 1366
Fly 1367 EKLQEADDF-----------IEIGTWSNDMADDIASFNQEDDDEDDAF-------HLP------- 1406
Fly 1407 ----------------VLPANVKFCDQQTRYGSPTF-------------WDVSNGESGFKGPKSS 1442
Fly 1443 QNKQGGKGKAKGPAKPTFNYY--------DSDNSLGSSYD--------------DDDNAGPLNYM 1485
Fly 1486 HHNYSSDDDDVADDIDAGRIAFTSKNEAETIETAQEVEKRQKQLSIIQATNANERQYQQTKNLLI 1550
Fly 1551 GFNFKHEDQKEPATIRYE---------ESIAKLKTEIESGGMLVPHDQQLVLKRSDAAEAQVAKV 1606
Fly 1607 SM-----MELLKQ----------------LLPYVNEDV--------LAKKLG----DRRELLLSD 1638
Fly 1639 LVELNADWVARH-------EQETYNVMGCGDSFDNYNDH--HRLNLDEKQLKLQYERIEIEPPTS 1694
Fly 1695 TKAITSAILPAGFSFDRQPDLVGHPGPSPSIILQALTMSNANDGINLERLETIGDSFLKYAITTY 1759
Fly 1760 LYITYENVHEGKLSHLRSKQVANLNLYRLGRRKRLGEYMIATKFEPHDNWLPPCYYVPKELEKAL 1824
Fly 1825 IEAKIPTHHWKLADLLDIKNLSSVQICEMVREKADALGLEQNGGAQNGQLDDSNDSCNDFSCFIP 1889
Fly 1890 YNLVSQHSIPDKSIADCVEALIGAYLIECGPR------GALLF------MAWLGVRVLPITRQLD 1942
Fly 1943 GGNQEQRIPGSTKPNAENVVTVYGAWPTPRSPLLHFAPNATEELDQLLSGFEEFEESLGYKFRDR 2007
Fly 2008 SYLLQAMTHASYTPNRLTDCY-QRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTI 2071
Fly 2072 FASLAVRHGFHKFFRHLSPGLNDVIDRFVRIQQENGHCISEEYYLLSEEECDDAEDVEVPKALGD 2136
Fly 2137 VFESIAGAIFLDSNMSLDVVWHVYSNM-MSPEIEQF----SNSVPKSPIRE-LLEL-----EPET 2190
Fly 2191 AKFGKPEKLADGRRVRVTVDVFCKGTFRGIGRNYRI--AKCTAAKCALRQ 2238 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Dcr-1 | NP_524453.1 | DEAD-like_helicase_N | 15..208 | CDD:421690 | |
Dicer_PBD | 240..344 | CDD:277191 | |||
DEAD-like_helicase_C | 490..614 | CDD:365791 | |||
Dicer_dimer | 825..916 | CDD:397444 | |||
PAZ_dicer_like | 1091..1212 | CDD:239209 | 23/113 (20%) | ||
RIBOc | 1724..1930 | CDD:238333 | 42/217 (19%) | ||
RIBOc | 2008..2172 | CDD:238333 | 46/169 (27%) | ||
DSRM_DICER | 2177..2240 | CDD:380680 | 19/69 (28%) | ||
DROSHA | NP_001369437.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..95 | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 130..406 | 31/151 (21%) | |||
U2AF_lg | 217..>317 | CDD:273727 | 8/44 (18%) | ||
Necessary for interaction with DGCR8 and pri-miRNA processing activity. /evidence=ECO:0000269|PubMed:26027739, ECO:0000269|PubMed:26748718 | 390..1365 | 234/1214 (19%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 452..497 | 12/45 (27%) | |||
RIBOc | 959..1079 | CDD:238333 | 43/218 (20%) | ||
rnc | 1105..1333 | CDD:234633 | 72/261 (28%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG0571 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |