Sequence 1: | NP_524453.1 | Gene: | Dcr-1 / 42693 | FlyBaseID: | FBgn0039016 | Length: | 2249 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001258211.1 | Gene: | DICER1 / 23405 | HGNCID: | 17098 | Length: | 1922 | Species: | Homo sapiens |
Alignment Length: | 2423 | Identity: | 768/2423 - (31%) |
---|---|---|---|
Similarity: | 1097/2423 - (45%) | Gaps: | 728/2423 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 5 WCDNNLHTTVFTPRDFQVELLATAYERNTIICLGHRSSKEFIALKLLQELSRRAR----RHGRVS 65
Fly 66 VYLSCEVGTSTEPC-SIYTMLTHLTDLRV----------------WQEQPDMQIPFDHCWTDYHV 113
Fly 114 SILRPEGFLYLLETRELLLSSVELIVLEDCHDSAV---YQRIRPLFENHIMPAPPADRPRILGLA 175
Fly 176 GPLHSAGCELQQLSAMLATLEQSVLCQIETASDIVTVLRYCSRPHEYIVQCAPFE-----MDELS 235
Fly 236 LVLADVLNTHKSFLLDHRYDPYEIYGTDQFMDELKDIPDPKVDPLNVINSLLVVLHEMGPWCTQR 300
Fly 301 AAHHFYQCNEKLKVKTPHE-----RHYLLYCLVSTALIQLYSLCEHAFHRHLGSGSDSRQTIE-R 359
Fly 360 YSSPKVRRLLQTLRCFKPEEVHTQADGLRRMRHQVDQADF--NRLSHTLESKCRMVDQMDQPPTE 422
Fly 423 TRALVATLEQILHTTEDRQTNRSAARVTPTPTPAHAKPKPSSGANTAQPRTRRRVYTRRHHRDHN 487
Fly 488 DGSDTLCALIYCNQNHTARVLFELLAEISRRDPDLKFLRCQYTTDR-VADPTTEPKEAELEHRRQ 551
Fly 552 EEVLKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPAYHVILVAP 616
Fly 617 SYKSPTVGSVQLTDRSHRYICATGDTTEADSDSDDSAMPNSSGSDPYTFGTARGTVKILNPEVFS 681
Fly 682 KQPPTACDIKLQEIQDELPAAAQLDTSNSSDEAVSMSNTSPSESSTEQKSRRFQCELSSLTEPED 746
Fly 747 TSDTTAEIDTAHSLASTTKDLVHQMAQYREIEQMLLSKCANTE-------PPEQEQSEAERFSAC 804
Fly 805 LAAYRPKPHLLT----GASVDLGSAIALVNKYCARLPSDTFTKLTALWRCTRNERAGVTLFQYTL 865
Fly 866 RLPINSPLKHDIVGLPMPTQTLARRLAALQACVELHRIGELDDQLQPIGKEGFRALEPDWECFEL 930
Fly 931 EPEDEQIVQLSDEPRPGTTKRRQYYYKRIASEFCDCRPVAGAPCYLYFIQLTLQCPIPEEQNTRG 995
Fly 996 RKIYPPEDAQQGFGILTTKRIPKLSAFSIFTRSGEVKVSLELAKERVILTSEQIVCINGFLNYTF 1060
Fly 1061 TNVLRLQKFLMLFDPDSTENCVFIVP-TVKAPAGGKHIDWQFLELIQANGNTMPRAVPDEERQAQ 1124
Fly 1125 P---FDPQRFQDAVVMPWYRNQDQPQYFYVAEICPHLSPLSCFPGDNYRTFKHYYLVKYGLTIQN 1186
Fly 1187 TSQPLLDVDHTSARLNFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQILVPELCTVHPFPASL 1251
Fly 1252 WRTAVCLPCILYRINGLLLADDIRKQVSADLGLGRQQIEDEDFEWPMLDFGWSLSEVLKKSRESK 1316
Fly 1317 QKESL------------KDDTINGKDLADVEKKPTSEETQLDKDSKDDKVEKSAIELIIEGEEKL 1369
Fly 1370 QEADDFIEIGTWSNDM-ADDIASFNQEDDDEDDAFHLPVLPANVKFCDQQTRYGSPTFWDVSNGE 1433
Fly 1434 SGFKGPKSSQNKQGGKGKAKGPAKPTFNYYDSDNSLGSSYDDDDNAGPLNYMHHNYSSDDDDVAD 1498
Fly 1499 DIDAGRIAFTSKNEAETIETAQEVEKRQKQLSIIQATNANERQYQQTKNLLIGFNFKHEDQKEPA 1563
Fly 1564 TIRYEESIAKLKTEIESGGMLVPHDQQLVLKRSDAAEAQVAKVSMMELLKQLLPYVNEDVLAKKL 1628
Fly 1629 GDRRELLLSDLVELNADWVARHEQETYNVMGCGDSFDNYNDHHRLNLDEKQLKLQYERIEIEPPT 1693
Fly 1694 STKAITSAILPAGFSFDRQPDLVGHP----GPSPSIILQALTMSNANDGINLERLETIGDSFLKY 1754
Fly 1755 AITTYLYITYENVHEGKLSHLRSKQVANLNLYRLGRRKRLGEYMIATKFEPHDNWLPPCYYV--- 1816
Fly 1817 -----------------------------------------PKE---LEKALIE----------- 1826
Fly 1827 ---------AKI---------PTHHWKL------------ADLLDIKNLSSVQIC-----EMVRE 1856
Fly 1857 KADALGL----EQNGGAQNGQLDDSNDSCNDFSCFIPYNLVSQHSIPDKSIADCVEALIGAYLIE 1917
Fly 1918 CGPRGALLFMAWLGVRVLPITRQLD----------GGNQEQR------IPGSTKPNAENVV--TV 1964
Fly 1965 YGAWPTPRSPLLHF-APNATEELDQLLSGFEEFEESLGYKFRDRSYLLQAMTHASYTPNRLTDCY 2028
Fly 2029 QRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLAVRHGFHKFFRHLSPGLN 2093
Fly 2094 DVIDRFVRIQQENGHCISEEYYL-LSEEECDDAEDVEVPKALGDVFESIAGAIFLDSNMSLDVVW 2157
Fly 2158 HVYSNMMSPEIEQFSNSVPKSPIRELLELEPETAKFGKPEKLADGRRVRVTVDVFCKGTFRGIGR 2222
Fly 2223 NYRIAKCTAAKCALRQLK 2240 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Dcr-1 | NP_524453.1 | DEAD-like_helicase_N | 15..208 | CDD:421690 | 66/216 (31%) |
Dicer_PBD | 240..344 | CDD:277191 | 23/108 (21%) | ||
DEAD-like_helicase_C | 490..614 | CDD:365791 | 57/124 (46%) | ||
Dicer_dimer | 825..916 | CDD:397444 | 49/90 (54%) | ||
PAZ_dicer_like | 1091..1212 | CDD:239209 | 55/123 (45%) | ||
RIBOc | 1724..1930 | CDD:238333 | 103/302 (34%) | ||
RIBOc | 2008..2172 | CDD:238333 | 108/164 (66%) | ||
DSRM_DICER | 2177..2240 | CDD:380680 | 39/62 (63%) | ||
DICER1 | NP_001258211.1 | DEXHc_dicer | 42..239 | CDD:350792 | 66/216 (31%) |
DECH box | 175..178 | 0/2 (0%) | |||
Required for interaction with PRKRA and TARBP2 | 256..595 | 121/578 (21%) | |||
Dicer_PBD | 271..365 | CDD:277191 | 25/123 (20%) | ||
SF2_C_dicer | 372..564 | CDD:350189 | 80/287 (28%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 409..433 | 4/25 (16%) | |||
Dicer_dimer | 630..718 | CDD:397444 | 49/90 (54%) | ||
PAZ_dicer_like | 886..1008 | CDD:239209 | 55/123 (45%) | ||
RIBOc | 1296..>1387 | CDD:197778 | 58/90 (64%) | ||
Rnc | 1666..1918 | CDD:223644 | 159/249 (64%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C165159716 | |
Domainoid | 1 | 1.000 | 186 | 1.000 | Domainoid score | I3374 |
eggNOG | 1 | 0.900 | - | - | E1_COG0571 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H13251 | |
Inparanoid | 1 | 1.050 | 934 | 1.000 | Inparanoid score | I348 |
Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S5945 |
OMA | 1 | 1.010 | - | - | QHG57860 | |
OrthoDB | 1 | 1.010 | - | - | D126291at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0002051 | |
OrthoInspector | 1 | 1.000 | - | - | oto88480 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_101152 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR14950 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R301 |
SonicParanoid | 1 | 1.000 | - | - | X1728 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
16 | 15.840 |