Sequence 1: | NP_524453.1 | Gene: | Dcr-1 / 42693 | FlyBaseID: | FBgn0039016 | Length: | 2249 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_683750.2 | Gene: | Dicer1 / 192119 | MGIID: | 2177178 | Length: | 1906 | Species: | Mus musculus |
Alignment Length: | 2419 | Identity: | 778/2419 - (32%) |
---|---|---|---|
Similarity: | 1102/2419 - (45%) | Gaps: | 726/2419 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 5 WCDNNLHTTVFTPRDFQVELLATAYERNTIICLGHRSSKEFIALKLLQELSRRAR----RHGRVS 65
Fly 66 VYLSCEVGTSTEPC-SIYTMLTHLTDLRVWQEQPDMQIPFDHCW---------TDYHVSILRPEG 120
Fly 121 FLYLLETRELLLSSVELIVLEDCHDSAV---YQRIRPLFENHIMPAPPADRPRILGLAGPLHSAG 182
Fly 183 CELQQLSAMLATLEQSVLCQIETASDIVTVLRYCSRPHEYIVQCAPFEMDELSLVLADVLNTHKS 247
Fly 248 FLLDHRYDPYE--IYGTDQFMDELKDI--------PDPKVDPLNVINSLLVVLHEMGPWCTQRAA 302
Fly 303 HHFYQCNEKLKVKTPHE-----RHYLLYCLVSTALIQLYSLCEHAFHRHLGSGSDSRQTIE-RYS 361
Fly 362 SPKVRRLLQTLRCFKPEEVHTQADGLRRMRHQVDQADF--NRLSHTLESKCRMVDQMDQPPTETR 424
Fly 425 ALVATLEQILHTTEDRQTNRSAARVTPTPTPAHAKPKPSSGANTAQPRTRRRVYTRRHHRDHNDG 489
Fly 490 SDTLCALIYCNQNHTARVLFELLAEISRRDPDLKFLRCQYTTDR-VADPTTEPKEAELEHRRQEE 553
Fly 554 VLKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGRARAAPAYHVILVAPSY 618
Fly 619 KSPTVGSVQLTDRSHRYICATGDTTEADSDSDDSAMPNSSGSDPYTFGTARGTVKILNPEVFSKQ 683
Fly 684 PPTACDIKLQEIQDELPAAAQLDTSNSSDEAVSMSNTSPSESSTEQKSRRFQCELSSLTEPEDTS 748
Fly 749 DTTAEIDTAHSLASTTKDLVHQMAQYREIEQMLLSKCANTEPPEQEQSEAERFSACLAAYRPKPH 813
Fly 814 LLT----GASVDLGSAIALVNKYCARLPSDTFTKLTALWRCTRNERAGVTLFQYTLRLPINSPLK 874
Fly 875 HDIVGLPMPTQTLARRLAALQACVELHRIGELDDQLQPIGKEGFRALEPDWECFELEPEDEQIVQ 939
Fly 940 LSDEPRPGTTKRRQYYYKRIASEFCDCRPVAGAPCYLYFIQLTLQCPIPEEQNTRGRKIYPPEDA 1004
Fly 1005 QQGFGILTTKRIPKLSAFSIFTRSGEVKVSLELAKERVILTSEQIVCINGFLNYTFTNVLRLQKF 1069
Fly 1070 LMLFDPDSTENCVFIVP-TVKAPAGGKHIDWQFLELIQANGNTMPRAVPDEERQAQP---FDPQR 1130
Fly 1131 FQDAVVMPWYRNQDQPQYFYVAEICPHLSPLSCFPGDNYRTFKHYYLVKYGLTIQNTSQPLLDVD 1195
Fly 1196 HTSARLNFLTPRYVNRKGVALPTSSEETKRAKRENLEQKQILVPELCTVHPFPASLWRTAVCLPC 1260
Fly 1261 ILYRINGLLLADDIRKQVSADLGLGRQQIEDEDFEWPMLDFGWSLSEVLKKSRESKQ-----KES 1320
Fly 1321 LKDDTINGKDLADV---------EKKPTSEETQLDKDSKDDKVEKSAIELIIEGEEKLQEADDFI 1376
Fly 1377 EIGTWSNDMADDIASFNQEDDDEDDAFHLPVLPANVKFCDQQTRYGSPTFWDVSNGESGFKGPKS 1441
Fly 1442 SQNKQGGKGKAKGPAKPTFNYYDSDNSLGSSYD----DDDNAGPLNYMHHNYSSDDDDVADDIDA 1502
Fly 1503 GRIAFTSKNEAETIETAQEVEKRQKQLSIIQATNANERQYQQTKNLLIGFNFKHEDQKEPA---- 1563
Fly 1564 --TIRYEESIAKLKTEIESGGMLVPHDQQLVLKRSDAAEAQVAKVSMMELLKQLLPYVNEDVLAK 1626
Fly 1627 KLGDRRELLLSDLVELNADWVARHEQETYNVMGCGDSFDNYNDHHRLNLDEKQLKLQYERIEIEP 1691
Fly 1692 PTSTKAITSAILPAGFSFDRQPDLVGHP----GPSPSIILQALTMSNANDGINLERLETIGDSFL 1752
Fly 1753 KYAITTYLYITYENVHEGKLSHLRSKQVANLNLYRLGRRKRLGEYMIATKFEPHDNWLPPCYYV- 1816
Fly 1817 ---------------------------------------PKE------------------LEKAL 1824
Fly 1825 I--------------EAKIPTHHWKL------------ADLLDIKNLSSVQIC-----EMVREKA 1858
Fly 1859 DALGL----EQNGGAQNGQLDDSNDSCNDFSCFIPYNLVSQHSIPDKSIADCVEALIGAYLIECG 1919
Fly 1920 PRGALLFMAWLGVRVLPITR-----------QLDGGNQEQRIPGS-TKP----NAENVVTVYGAW 1968
Fly 1969 PTPRSPLLHF-APNATEELDQLLSGFEEFEESLGYKFRDRSYLLQAMTHASYTPNRLTDCYQRLE 2032
Fly 2033 FLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALVNNTIFASLAVRHGFHKFFRHLSPGLNDVID 2097
Fly 2098 RFVRIQQENGHCISEEYYL-LSEEECDDAEDVEVPKALGDVFESIAGAIFLDSNMSLDVVWHVYS 2161
Fly 2162 NMMSPEIEQFSNSVPKSPIRELLELEPETAKFGKPEKLADGRRVRVTVDVFCKGTFRGIGRNYRI 2226
Fly 2227 AKCTAAKCALRQLK 2240 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Dcr-1 | NP_524453.1 | DEAD-like_helicase_N | 15..208 | CDD:421690 | 65/209 (31%) |
Dicer_PBD | 240..344 | CDD:277191 | 26/118 (22%) | ||
DEAD-like_helicase_C | 490..614 | CDD:365791 | 59/124 (48%) | ||
Dicer_dimer | 825..916 | CDD:397444 | 48/90 (53%) | ||
PAZ_dicer_like | 1091..1212 | CDD:239209 | 56/123 (46%) | ||
RIBOc | 1724..1930 | CDD:238333 | 101/298 (34%) | ||
RIBOc | 2008..2172 | CDD:238333 | 109/164 (66%) | ||
DSRM_DICER | 2177..2240 | CDD:380680 | 39/62 (63%) | ||
Dicer1 | NP_683750.2 | DEXHc_dicer | 32..229 | CDD:350792 | 65/209 (31%) |
Dicer_PBD | 261..355 | CDD:277191 | 22/107 (21%) | ||
SF2_C_dicer | 362..554 | CDD:350189 | 84/287 (29%) | ||
Dicer_dimer | 620..708 | CDD:367465 | 48/90 (53%) | ||
PAZ_dicer_like | 876..998 | CDD:239209 | 56/123 (46%) | ||
RIBOc | 1286..>1377 | CDD:197778 | 58/90 (64%) | ||
Rnc | 1650..1902 | CDD:223644 | 160/249 (64%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C167850088 | |
Domainoid | 1 | 1.000 | 186 | 1.000 | Domainoid score | I3358 |
eggNOG | 1 | 0.900 | - | - | E1_COG0571 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H13251 | |
Inparanoid | 1 | 1.050 | 1077 | 1.000 | Inparanoid score | I249 |
Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S5945 |
OMA | 1 | 1.010 | - | - | QHG57860 | |
OrthoDB | 1 | 1.010 | - | - | D1337630at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0002051 | |
OrthoInspector | 1 | 1.000 | - | - | oto92051 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_101152 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR14950 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R301 |
SonicParanoid | 1 | 1.000 | - | - | X1728 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
16 | 15.840 |