| Sequence 1: | NP_524453.1 | Gene: | Dcr-1 / 42693 | FlyBaseID: | FBgn0039016 | Length: | 2249 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_492161.3 | Gene: | drh-3 / 172546 | WormBaseID: | WBGene00008400 | Length: | 1119 | Species: | Caenorhabditis elegans |
| Alignment Length: | 699 | Identity: | 131/699 - (18%) |
|---|---|---|---|
| Similarity: | 233/699 - (33%) | Gaps: | 247/699 - (35%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 18 RDFQVELLATAYE-RNTIICLGHRSSKEFIALKLLQELSRRARRHGRVSVYLSCEVGTSTEPCSI 81
Fly 82 YTMLTHLTDLRVWQEQPDM------QIP---------FDHCWTDY-------------------- 111
Fly 112 ----HVSILRPEGFLYLLET----RELLLSSVELIVLEDCHDSAVYQRIRP-LFENHIMPAPPAD 167
Fly 168 RPRILGLAGPL-------HSAGCELQQLSAMLATLEQSVLCQIETASDIVTVLRYCSRPHEYIVQ 225
Fly 226 CAPFEMDELSLVLADVLNTHKSFLLDHRYDPYEIYGTDQFMDEL----KDIPDPKVDPLNVINSL 286
Fly 287 LVVLHEMGPWCTQRAAHHFYQ------CNEKLKVKTPHE------RHYLLYCLVSTALIQL---- 335
Fly 336 --YSLCEHAFHRHLGSGSDSRQTIERYSS--PKVRRLLQTLRCFKPEEVHTQADGLRRMRHQVDQ 396
Fly 397 ADFNRLSHTLESKCRMVDQMDQPPTETRALVATLEQILHTTEDRQTNRSAARVTPTPTPAHAKPK 461
Fly 462 PSSGANTAQPRTRRRVYTRRHHRDHNDGSDTLCALIYCNQNHTARVLFELLAEISRRDPDLKFLR 526
Fly 527 CQYTTDRVADPTTEPKEAELEHRRQEE--VLKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDP 589
Fly 590 PT-TYRSYVQCKGRARAAPAYHVILVAPSYKSPTVGSVQLTDRSHRYIC 637 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Dcr-1 | NP_524453.1 | DEAD-like_helicase_N | 15..208 | CDD:421690 | 44/241 (18%) |
| Dicer_PBD | 240..344 | CDD:277191 | 21/125 (17%) | ||
| DEAD-like_helicase_C | 490..614 | CDD:365791 | 35/126 (28%) | ||
| Dicer_dimer | 825..916 | CDD:397444 | |||
| PAZ_dicer_like | 1091..1212 | CDD:239209 | |||
| RIBOc | 1724..1930 | CDD:238333 | |||
| RIBOc | 2008..2172 | CDD:238333 | |||
| DSRM_DICER | 2177..2240 | CDD:380680 | |||
| drh-3 | NP_492161.3 | DEXDc | 371..572 | CDD:214692 | 43/236 (18%) |
| DEAD | 372..545 | CDD:278688 | 38/209 (18%) | ||
| SrmB | <729..993 | CDD:223587 | 56/276 (20%) | ||
| Helicase_C | 749..872 | CDD:278689 | 41/204 (20%) | ||
| RLR_C | 948..1062 | CDD:276942 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 1 | 1.010 | - | - | D1337630at2759 | |
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R301 |
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 3 | 2.950 | |||||